Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBX5P45973 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.04■□□□□ 0.16
CBX5P45973 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBX5P45973 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
CBX5P45973 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBX5P45973 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBX5P45973 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CBX5P45973 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBX5P45973 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CBX5P45973 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.04■□□□□ 0.16
CBX5P45973 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.04■□□□□ 0.16
CBX5P45973 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBX5P45973 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.04■□□□□ 0.16
CBX5P45973 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CBX5P45973 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.04■□□□□ 0.16
CBX5P45973 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBX5P45973 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CBX5P45973 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBX5P45973 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBX5P45973 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBX5P45973 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CBX5P45973 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBX5P45973 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBX5P45973 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CBX5P45973 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBX5P45973 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CBX5P45973 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBX5P45973 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CBX5P45973 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CBX5P45973 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX5P45973 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX5P45973 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX5P45973 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.03■□□□□ 0.16
CBX5P45973 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CBX5P45973 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.03■□□□□ 0.16
CBX5P45973 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX5P45973 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX5P45973 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
CBX5P45973 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CBX5P45973 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.03■□□□□ 0.16
CBX5P45973 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.03■□□□□ 0.16
CBX5P45973 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.03■□□□□ 0.16
CBX5P45973 TUBB8P6-201ENST00000436895 1288 ntBASIC16.03■□□□□ 0.16
CBX5P45973 KRT18P16-201ENST00000510337 1294 ntBASIC16.03■□□□□ 0.16
CBX5P45973 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.03■□□□□ 0.16
CBX5P45973 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CBX5P45973 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX5P45973 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CBX5P45973 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX5P45973 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
CBX5P45973 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX5P45973 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CBX5P45973 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
CBX5P45973 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CBX5P45973 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CBX5P45973 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
CBX5P45973 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CBX5P45973 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CBX5P45973 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CBX5P45973 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CBX5P45973 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.02■□□□□ 0.16
CBX5P45973 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CBX5P45973 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CBX5P45973 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CBX5P45973 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CBX5P45973 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CBX5P45973 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CBX5P45973 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.02■□□□□ 0.16
CBX5P45973 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CBX5P45973 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CBX5P45973 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CBX5P45973 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CBX5P45973 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.02■□□□□ 0.16
CBX5P45973 PLD4-205ENST00000553861 667 ntTSL 2 BASIC16.02■□□□□ 0.16
CBX5P45973 AC133552.2-202ENST00000575694 574 ntBASIC16.02■□□□□ 0.16
CBX5P45973 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CBX5P45973 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC16.02■□□□□ 0.16
CBX5P45973 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.02■□□□□ 0.16
CBX5P45973 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.02■□□□□ 0.16
CBX5P45973 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CBX5P45973 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CBX5P45973 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CBX5P45973 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CBX5P45973 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CBX5P45973 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CBX5P45973 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.02■□□□□ 0.15
CBX5P45973 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CBX5P45973 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.02■□□□□ 0.15
CBX5P45973 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.02■□□□□ 0.15
CBX5P45973 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CBX5P45973 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CBX5P45973 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CBX5P45973 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
CBX5P45973 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CBX5P45973 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CBX5P45973 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CBX5P45973 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CBX5P45973 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CBX5P45973 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CBX5P45973 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms