Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC1A3P43003 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC1A3P43003 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
SLC1A3P43003 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.14■□□□□ 0.33
SLC1A3P43003 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC1A3P43003 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
SLC1A3P43003 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC1A3P43003 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC1A3P43003 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC1A3P43003 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
SLC1A3P43003 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SLC1A3P43003 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.14■□□□□ 0.33
SLC1A3P43003 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SLC1A3P43003 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC1A3P43003 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.14■□□□□ 0.33
SLC1A3P43003 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC1A3P43003 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC1A3P43003 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
SLC1A3P43003 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SLC1A3P43003 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC1A3P43003 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC1A3P43003 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC1A3P43003 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SLC1A3P43003 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SLC1A3P43003 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC1A3P43003 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC1A3P43003 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
SLC1A3P43003 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
SLC1A3P43003 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC1A3P43003 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SLC1A3P43003 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC1A3P43003 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
SLC1A3P43003 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC1A3P43003 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC1A3P43003 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
SLC1A3P43003 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC1A3P43003 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.13■□□□□ 0.33
SLC1A3P43003 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC1A3P43003 AC068587.9-201ENST00000641814 219 ntBASIC17.13■□□□□ 0.33
SLC1A3P43003 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC1A3P43003 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC1A3P43003 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC1A3P43003 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC1A3P43003 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC1A3P43003 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC1A3P43003 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC1A3P43003 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC1A3P43003 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SLC1A3P43003 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SLC1A3P43003 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC1A3P43003 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC1A3P43003 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC1A3P43003 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC1A3P43003 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A3P43003 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A3P43003 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A3P43003 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.12■□□□□ 0.33
SLC1A3P43003 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC1A3P43003 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SLC1A3P43003 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A3P43003 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A3P43003 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A3P43003 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A3P43003 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A3P43003 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A3P43003 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A3P43003 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC1A3P43003 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A3P43003 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC1A3P43003 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A3P43003 TSPY7P-201ENST00000431358 1114 ntBASIC17.12■□□□□ 0.33
SLC1A3P43003 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A3P43003 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A3P43003 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A3P43003 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.12■□□□□ 0.33
SLC1A3P43003 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.12■□□□□ 0.33
SLC1A3P43003 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.12■□□□□ 0.33
SLC1A3P43003 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.12■□□□□ 0.33
SLC1A3P43003 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.12■□□□□ 0.33
SLC1A3P43003 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.12■□□□□ 0.33
SLC1A3P43003 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A3P43003 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A3P43003 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A3P43003 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.12■□□□□ 0.33
SLC1A3P43003 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A3P43003 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.12■□□□□ 0.33
SLC1A3P43003 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SLC1A3P43003 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC1A3P43003 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
SLC1A3P43003 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC1A3P43003 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC1A3P43003 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC1A3P43003 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A3P43003 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
SLC1A3P43003 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC1A3P43003 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A3P43003 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC1A3P43003 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.11■□□□□ 0.33
SLC1A3P43003 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC1A3P43003 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms