Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCNFP41002 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNFP41002 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.74■□□□□ 0.59
CCNFP41002 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CCNFP41002 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNFP41002 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCNFP41002 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.74■□□□□ 0.59
CCNFP41002 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNFP41002 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CCNFP41002 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNFP41002 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNFP41002 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNFP41002 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.74■□□□□ 0.59
CCNFP41002 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNFP41002 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.74■□□□□ 0.59
CCNFP41002 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCNFP41002 FAM197Y1-201ENST00000421178 764 ntBASIC18.74■□□□□ 0.59
CCNFP41002 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCNFP41002 Z99916.2-201ENST00000604037 246 ntBASIC18.74■□□□□ 0.59
CCNFP41002 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCNFP41002 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CCNFP41002 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CCNFP41002 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CCNFP41002 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CCNFP41002 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CCNFP41002 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CCNFP41002 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNFP41002 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCNFP41002 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNFP41002 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCNFP41002 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNFP41002 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNFP41002 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNFP41002 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.73■□□□□ 0.59
CCNFP41002 Z85996.1-201ENST00000494644 937 ntBASIC18.73■□□□□ 0.59
CCNFP41002 AC113410.3-201ENST00000623366 203 ntBASIC18.73■□□□□ 0.59
CCNFP41002 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.73■□□□□ 0.59
CCNFP41002 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCNFP41002 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNFP41002 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.73■□□□□ 0.59
CCNFP41002 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CCNFP41002 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNFP41002 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCNFP41002 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CCNFP41002 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNFP41002 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNFP41002 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.72■□□□□ 0.59
CCNFP41002 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.72■□□□□ 0.59
CCNFP41002 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCNFP41002 AC012313.1-201ENST00000593393 3059 ntBASIC18.72■□□□□ 0.59
CCNFP41002 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.72■□□□□ 0.59
CCNFP41002 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNFP41002 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.72■□□□□ 0.59
CCNFP41002 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNFP41002 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.72■□□□□ 0.59
CCNFP41002 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCNFP41002 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.72■□□□□ 0.59
CCNFP41002 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.72■□□□□ 0.59
CCNFP41002 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.72■□□□□ 0.59
CCNFP41002 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.72■□□□□ 0.59
CCNFP41002 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNFP41002 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CCNFP41002 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.72■□□□□ 0.59
CCNFP41002 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.72■□□□□ 0.59
CCNFP41002 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.72■□□□□ 0.59
CCNFP41002 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.72■□□□□ 0.59
CCNFP41002 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCNFP41002 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
CCNFP41002 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNFP41002 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCNFP41002 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.71■□□□□ 0.59
CCNFP41002 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCNFP41002 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CCNFP41002 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.71■□□□□ 0.59
CCNFP41002 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCNFP41002 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNFP41002 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNFP41002 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNFP41002 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCNFP41002 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.71■□□□□ 0.59
CCNFP41002 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNFP41002 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CCNFP41002 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CCNFP41002 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.71■□□□□ 0.59
CCNFP41002 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
CCNFP41002 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.71■□□□□ 0.59
CCNFP41002 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.71■□□□□ 0.59
CCNFP41002 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.71■□□□□ 0.59
CCNFP41002 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.71■□□□□ 0.59
CCNFP41002 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.71■□□□□ 0.59
CCNFP41002 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.71■□□□□ 0.59
CCNFP41002 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNFP41002 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNFP41002 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CCNFP41002 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNFP41002 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNFP41002 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.71■□□□□ 0.59
CCNFP41002 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNFP41002 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNFP41002 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms