Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HADHAP40939 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.85■□□□□ 0.61
HADHAP40939 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HADHAP40939 AC073592.3-201ENST00000625118 1834 ntBASIC18.85■□□□□ 0.61
HADHAP40939 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.85■□□□□ 0.61
HADHAP40939 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HADHAP40939 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HADHAP40939 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HADHAP40939 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HADHAP40939 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HADHAP40939 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HADHAP40939 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HADHAP40939 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.85■□□□□ 0.61
HADHAP40939 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
HADHAP40939 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HADHAP40939 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HADHAP40939 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HADHAP40939 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HADHAP40939 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HADHAP40939 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HADHAP40939 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.84■□□□□ 0.61
HADHAP40939 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.84■□□□□ 0.61
HADHAP40939 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HADHAP40939 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HADHAP40939 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HADHAP40939 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HADHAP40939 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HADHAP40939 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HADHAP40939 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HADHAP40939 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
HADHAP40939 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.84■□□□□ 0.61
HADHAP40939 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HADHAP40939 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HADHAP40939 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.84■□□□□ 0.61
HADHAP40939 FITM1-202ENST00000559294 800 ntBASIC18.84■□□□□ 0.61
HADHAP40939 AP000525.1-201ENST00000608286 694 ntBASIC18.84■□□□□ 0.61
HADHAP40939 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HADHAP40939 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HADHAP40939 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HADHAP40939 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HADHAP40939 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.84■□□□□ 0.61
HADHAP40939 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HADHAP40939 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HADHAP40939 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HADHAP40939 KRT8P32-201ENST00000512863 1461 ntBASIC18.84■□□□□ 0.61
HADHAP40939 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HADHAP40939 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
HADHAP40939 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HADHAP40939 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.83■□□□□ 0.61
HADHAP40939 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
HADHAP40939 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HADHAP40939 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HADHAP40939 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
HADHAP40939 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.83■□□□□ 0.61
HADHAP40939 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
HADHAP40939 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
HADHAP40939 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HADHAP40939 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HADHAP40939 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.83■□□□□ 0.6
HADHAP40939 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HADHAP40939 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.83■□□□□ 0.6
HADHAP40939 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HADHAP40939 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HADHAP40939 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.83■□□□□ 0.6
HADHAP40939 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HADHAP40939 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HADHAP40939 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
HADHAP40939 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.83■□□□□ 0.6
HADHAP40939 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
HADHAP40939 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HADHAP40939 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HADHAP40939 HEIH-201ENST00000623091 1652 ntBASIC18.82■□□□□ 0.6
HADHAP40939 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HADHAP40939 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HADHAP40939 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HADHAP40939 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HADHAP40939 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HADHAP40939 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
HADHAP40939 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
HADHAP40939 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.82■□□□□ 0.6
HADHAP40939 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.82■□□□□ 0.6
HADHAP40939 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.82■□□□□ 0.6
HADHAP40939 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.82■□□□□ 0.6
HADHAP40939 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.82■□□□□ 0.6
HADHAP40939 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.82■□□□□ 0.6
HADHAP40939 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HADHAP40939 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HADHAP40939 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HADHAP40939 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HADHAP40939 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HADHAP40939 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.82■□□□□ 0.6
HADHAP40939 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HADHAP40939 AL354751.1-201ENST00000412768 1863 ntBASIC18.82■□□□□ 0.6
HADHAP40939 HTR7P1-202ENST00000624664 4411 ntBASIC18.82■□□□□ 0.6
HADHAP40939 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
HADHAP40939 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HADHAP40939 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.81■□□□□ 0.6
HADHAP40939 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HADHAP40939 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HADHAP40939 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms