Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CHMP24386 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CHMP24386 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP24386 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.42■□□□□ 0.38
CHMP24386 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP24386 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.42■□□□□ 0.38
CHMP24386 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.42■□□□□ 0.38
CHMP24386 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP24386 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP24386 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CHMP24386 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP24386 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP24386 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP24386 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP24386 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.41■□□□□ 0.38
CHMP24386 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP24386 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP24386 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP24386 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP24386 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP24386 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CHMP24386 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP24386 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP24386 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP24386 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP24386 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP24386 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP24386 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP24386 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.41■□□□□ 0.38
CHMP24386 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.41■□□□□ 0.38
CHMP24386 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.41■□□□□ 0.38
CHMP24386 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.41■□□□□ 0.38
CHMP24386 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.41■□□□□ 0.38
CHMP24386 AC011298.2-201ENST00000617989 482 ntBASIC17.41■□□□□ 0.38
CHMP24386 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.41■□□□□ 0.38
CHMP24386 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.41■□□□□ 0.38
CHMP24386 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.41■□□□□ 0.38
CHMP24386 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP24386 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP24386 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP24386 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP24386 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP24386 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHMP24386 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CHMP24386 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP24386 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.4■□□□□ 0.38
CHMP24386 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP24386 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP24386 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP24386 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CHMP24386 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP24386 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP24386 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.4■□□□□ 0.38
CHMP24386 AC068880.1-201ENST00000507289 2297 ntBASIC17.4■□□□□ 0.38
CHMP24386 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP24386 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP24386 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP24386 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP24386 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP24386 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP24386 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP24386 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP24386 AC211429.1-201ENST00000415277 523 ntBASIC17.4■□□□□ 0.38
CHMP24386 AC087499.1-201ENST00000418141 1075 ntBASIC17.4■□□□□ 0.38
CHMP24386 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.4■□□□□ 0.38
CHMP24386 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP24386 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.4■□□□□ 0.38
CHMP24386 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.4■□□□□ 0.38
CHMP24386 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.4■□□□□ 0.38
CHMP24386 FITM1-202ENST00000559294 800 ntBASIC17.4■□□□□ 0.38
CHMP24386 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CHMP24386 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.4■□□□□ 0.38
CHMP24386 AP000525.1-201ENST00000608286 694 ntBASIC17.4■□□□□ 0.38
CHMP24386 AP000692.2-201ENST00000608391 879 ntBASIC17.4■□□□□ 0.38
CHMP24386 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CHMP24386 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP24386 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CHMP24386 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP24386 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.4■□□□□ 0.38
CHMP24386 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP24386 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP24386 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.4■□□□□ 0.38
CHMP24386 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP24386 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP24386 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP24386 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CHMP24386 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP24386 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
CHMP24386 AP000997.3-201ENST00000623333 2250 ntBASIC17.4■□□□□ 0.38
CHMP24386 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CHMP24386 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP24386 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMP24386 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.4■□□□□ 0.38
CHMP24386 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.39■□□□□ 0.38
CHMP24386 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
CHMP24386 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
CHMP24386 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.39■□□□□ 0.37
CHMP24386 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.39■□□□□ 0.37
CHMP24386 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CHMP24386 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms