Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.68■□□□□ 0.42
MMP11P24347 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.68■□□□□ 0.42
MMP11P24347 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.68■□□□□ 0.42
MMP11P24347 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.68■□□□□ 0.42
MMP11P24347 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MMP11P24347 CR769767.2-201ENST00000622735 460 ntBASIC17.68■□□□□ 0.42
MMP11P24347 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.68■□□□□ 0.42
MMP11P24347 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MMP11P24347 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
MMP11P24347 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
MMP11P24347 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MMP11P24347 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MMP11P24347 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MMP11P24347 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MMP11P24347 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MMP11P24347 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.67■□□□□ 0.42
MMP11P24347 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MMP11P24347 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
MMP11P24347 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MMP11P24347 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.67■□□□□ 0.42
MMP11P24347 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.67■□□□□ 0.42
MMP11P24347 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
MMP11P24347 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MMP11P24347 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.67■□□□□ 0.42
MMP11P24347 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.67■□□□□ 0.42
MMP11P24347 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
MMP11P24347 AL121956.5-201ENST00000625261 221 ntBASIC17.67■□□□□ 0.42
MMP11P24347 AL358472.4-201ENST00000633140 710 ntBASIC17.67■□□□□ 0.42
MMP11P24347 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
MMP11P24347 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MMP11P24347 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
MMP11P24347 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MMP11P24347 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MMP11P24347 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
MMP11P24347 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MMP11P24347 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
MMP11P24347 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MMP11P24347 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.66■□□□□ 0.42
MMP11P24347 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.66■□□□□ 0.42
MMP11P24347 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.66■□□□□ 0.42
MMP11P24347 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MMP11P24347 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.66■□□□□ 0.42
MMP11P24347 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.66■□□□□ 0.42
MMP11P24347 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.66■□□□□ 0.42
MMP11P24347 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MMP11P24347 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MMP11P24347 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MMP11P24347 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
MMP11P24347 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MMP11P24347 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
MMP11P24347 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
MMP11P24347 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MMP11P24347 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MMP11P24347 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MMP11P24347 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.66■□□□□ 0.42
MMP11P24347 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MMP11P24347 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP11P24347 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP11P24347 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MMP11P24347 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.65■□□□□ 0.42
MMP11P24347 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.65■□□□□ 0.42
MMP11P24347 KRT8P3-201ENST00000519669 1449 ntBASIC17.65■□□□□ 0.42
MMP11P24347 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.65■□□□□ 0.42
MMP11P24347 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP11P24347 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
MMP11P24347 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
MMP11P24347 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP11P24347 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
MMP11P24347 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP11P24347 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
MMP11P24347 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP11P24347 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP11P24347 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.65■□□□□ 0.42
MMP11P24347 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MMP11P24347 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.65■□□□□ 0.42
MMP11P24347 AL671277.2-201ENST00000458060 996 ntBASIC17.65■□□□□ 0.42
MMP11P24347 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
MMP11P24347 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.65■□□□□ 0.42
MMP11P24347 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.65■□□□□ 0.42
MMP11P24347 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MMP11P24347 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MMP11P24347 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
MMP11P24347 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
MMP11P24347 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.65■□□□□ 0.42
MMP11P24347 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP11P24347 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
MMP11P24347 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MMP11P24347 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MMP11P24347 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP11P24347 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MMP11P24347 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.65■□□□□ 0.42
MMP11P24347 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
MMP11P24347 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MMP11P24347 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
MMP11P24347 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
MMP11P24347 GPAT2P1-201ENST00000444924 1672 ntBASIC17.64■□□□□ 0.42
MMP11P24347 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
MMP11P24347 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
MMP11P24347 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.64■□□□□ 0.41
MMP11P24347 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms