Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH3P22223 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH3P22223 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.22■□□□□ 0.51
CDH3P22223 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH3P22223 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH3P22223 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH3P22223 TEX21P-204ENST00000641479 1693 ntBASIC18.22■□□□□ 0.51
CDH3P22223 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH3P22223 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH3P22223 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDH3P22223 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH3P22223 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH3P22223 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH3P22223 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.21■□□□□ 0.51
CDH3P22223 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.21■□□□□ 0.51
CDH3P22223 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CDH3P22223 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDH3P22223 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH3P22223 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH3P22223 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDH3P22223 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH3P22223 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH3P22223 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH3P22223 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH3P22223 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH3P22223 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH3P22223 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.51
CDH3P22223 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.21■□□□□ 0.51
CDH3P22223 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH3P22223 AC104076.2-201ENST00000448912 469 ntBASIC18.21■□□□□ 0.51
CDH3P22223 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH3P22223 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CDH3P22223 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.21■□□□□ 0.51
CDH3P22223 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.21■□□□□ 0.51
CDH3P22223 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.21■□□□□ 0.51
CDH3P22223 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.21■□□□□ 0.51
CDH3P22223 AC141257.4-201ENST00000634557 245 ntBASIC18.21■□□□□ 0.51
CDH3P22223 AC136944.6-201ENST00000634818 245 ntBASIC18.21■□□□□ 0.51
CDH3P22223 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
CDH3P22223 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH3P22223 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.21■□□□□ 0.51
CDH3P22223 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH3P22223 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.21■□□□□ 0.51
CDH3P22223 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDH3P22223 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
CDH3P22223 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.21■□□□□ 0.5
CDH3P22223 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.2■□□□□ 0.5
CDH3P22223 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CDH3P22223 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.2■□□□□ 0.5
CDH3P22223 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDH3P22223 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.2■□□□□ 0.5
CDH3P22223 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.2■□□□□ 0.5
CDH3P22223 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH3P22223 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH3P22223 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.2■□□□□ 0.5
CDH3P22223 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH3P22223 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH3P22223 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.2■□□□□ 0.5
CDH3P22223 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH3P22223 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH3P22223 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.2■□□□□ 0.5
CDH3P22223 AK4P3-201ENST00000418260 669 ntBASIC18.2■□□□□ 0.5
CDH3P22223 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.2■□□□□ 0.5
CDH3P22223 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.2■□□□□ 0.5
CDH3P22223 DUX4L26-201ENST00000489078 1255 ntBASIC18.2■□□□□ 0.5
CDH3P22223 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.2■□□□□ 0.5
CDH3P22223 AC006011.2-201ENST00000621313 1158 ntBASIC18.2■□□□□ 0.5
CDH3P22223 AL138966.2-201ENST00000621997 464 ntBASIC18.2■□□□□ 0.5
CDH3P22223 AL590326.2-201ENST00000625139 305 ntBASIC18.2■□□□□ 0.5
CDH3P22223 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
CDH3P22223 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH3P22223 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH3P22223 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.2■□□□□ 0.5
CDH3P22223 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH3P22223 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH3P22223 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH3P22223 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CDH3P22223 PCDHB18P-201ENST00000524813 2368 ntBASIC18.19■□□□□ 0.5
CDH3P22223 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CDH3P22223 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDH3P22223 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH3P22223 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH3P22223 AP000997.3-201ENST00000623333 2250 ntBASIC18.19■□□□□ 0.5
CDH3P22223 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH3P22223 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH3P22223 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH3P22223 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH3P22223 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH3P22223 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH3P22223 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH3P22223 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDH3P22223 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH3P22223 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.19■□□□□ 0.5
CDH3P22223 KRT8P45-201ENST00000414328 1447 ntBASIC18.19■□□□□ 0.5
CDH3P22223 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.19■□□□□ 0.5
CDH3P22223 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH3P22223 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.19■□□□□ 0.5
CDH3P22223 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH3P22223 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH3P22223 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms