Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.94■□□□□ 0.46
CAPN3P20807 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.94■□□□□ 0.46
CAPN3P20807 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.94■□□□□ 0.46
CAPN3P20807 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.94■□□□□ 0.46
CAPN3P20807 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CAPN3P20807 AC107956.1-201ENST00000494359 873 ntBASIC17.94■□□□□ 0.46
CAPN3P20807 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CAPN3P20807 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.94■□□□□ 0.46
CAPN3P20807 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.94■□□□□ 0.46
CAPN3P20807 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CAPN3P20807 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.94■□□□□ 0.46
CAPN3P20807 AC133561.5-201ENST00000635547 218 ntBASIC17.94■□□□□ 0.46
CAPN3P20807 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CAPN3P20807 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.94■□□□□ 0.46
CAPN3P20807 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CAPN3P20807 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CAPN3P20807 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CAPN3P20807 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CAPN3P20807 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
CAPN3P20807 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.94■□□□□ 0.46
CAPN3P20807 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.94■□□□□ 0.46
CAPN3P20807 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CAPN3P20807 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
CAPN3P20807 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
CAPN3P20807 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CAPN3P20807 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CAPN3P20807 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CAPN3P20807 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.93■□□□□ 0.46
CAPN3P20807 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CAPN3P20807 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CAPN3P20807 AL135905.2-201ENST00000584934 1404 ntBASIC17.93■□□□□ 0.46
CAPN3P20807 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CAPN3P20807 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CAPN3P20807 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.93■□□□□ 0.46
CAPN3P20807 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.93■□□□□ 0.46
CAPN3P20807 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CAPN3P20807 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.93■□□□□ 0.46
CAPN3P20807 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CAPN3P20807 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.93■□□□□ 0.46
CAPN3P20807 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.93■□□□□ 0.46
CAPN3P20807 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.93■□□□□ 0.46
CAPN3P20807 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.93■□□□□ 0.46
CAPN3P20807 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CAPN3P20807 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.93■□□□□ 0.46
CAPN3P20807 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CAPN3P20807 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CAPN3P20807 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.93■□□□□ 0.46
CAPN3P20807 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CAPN3P20807 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CAPN3P20807 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CAPN3P20807 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CAPN3P20807 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CAPN3P20807 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CAPN3P20807 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CAPN3P20807 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
CAPN3P20807 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.92■□□□□ 0.46
CAPN3P20807 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CAPN3P20807 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.92■□□□□ 0.46
CAPN3P20807 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CAPN3P20807 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CAPN3P20807 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CAPN3P20807 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.92■□□□□ 0.46
CAPN3P20807 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CAPN3P20807 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CAPN3P20807 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.92■□□□□ 0.46
CAPN3P20807 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.92■□□□□ 0.46
CAPN3P20807 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CAPN3P20807 MIR4785-201ENST00000585005 73 ntBASIC17.92■□□□□ 0.46
CAPN3P20807 AC069544.1-201ENST00000609399 999 ntBASIC17.92■□□□□ 0.46
CAPN3P20807 AC097493.4-201ENST00000641197 219 ntBASIC17.92■□□□□ 0.46
CAPN3P20807 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CAPN3P20807 NBPF21P-201ENST00000425093 1451 ntBASIC17.92■□□□□ 0.46
CAPN3P20807 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CAPN3P20807 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CAPN3P20807 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.92■□□□□ 0.46
CAPN3P20807 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CAPN3P20807 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.92■□□□□ 0.46
CAPN3P20807 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CAPN3P20807 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CAPN3P20807 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CAPN3P20807 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CAPN3P20807 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CAPN3P20807 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CAPN3P20807 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CAPN3P20807 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
CAPN3P20807 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CAPN3P20807 ESPNP-201ENST00000270691 2015 ntBASIC17.91■□□□□ 0.46
CAPN3P20807 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CAPN3P20807 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CAPN3P20807 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CAPN3P20807 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.91■□□□□ 0.46
CAPN3P20807 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.91■□□□□ 0.46
CAPN3P20807 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CAPN3P20807 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CAPN3P20807 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.91■□□□□ 0.46
CAPN3P20807 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.91■□□□□ 0.46
CAPN3P20807 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.91■□□□□ 0.46
CAPN3P20807 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.91■□□□□ 0.46
CAPN3P20807 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.91■□□□□ 0.46
CAPN3P20807 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms