Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3BP20337 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3BP20337 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RAB3BP20337 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3BP20337 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
RAB3BP20337 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.32■□□□□ 0.2
RAB3BP20337 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3BP20337 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RAB3BP20337 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
RAB3BP20337 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB3BP20337 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.32■□□□□ 0.2
RAB3BP20337 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3BP20337 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.32■□□□□ 0.2
RAB3BP20337 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.32■□□□□ 0.2
RAB3BP20337 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB3BP20337 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB3BP20337 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
RAB3BP20337 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
RAB3BP20337 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3BP20337 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3BP20337 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB3BP20337 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
RAB3BP20337 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RAB3BP20337 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3BP20337 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3BP20337 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3BP20337 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.31■□□□□ 0.2
RAB3BP20337 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3BP20337 GUK1-205ENST00000366722 850 ntTSL 3 BASIC16.31■□□□□ 0.2
RAB3BP20337 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB3BP20337 BX276092.2-201ENST00000417668 665 ntBASIC16.31■□□□□ 0.2
RAB3BP20337 KRT18P5-201ENST00000436075 1291 ntBASIC16.31■□□□□ 0.2
RAB3BP20337 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3BP20337 AC133552.2-202ENST00000575694 574 ntBASIC16.31■□□□□ 0.2
RAB3BP20337 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.31■□□□□ 0.2
RAB3BP20337 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
RAB3BP20337 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB3BP20337 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3BP20337 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3BP20337 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
RAB3BP20337 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3BP20337 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3BP20337 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.31■□□□□ 0.2
RAB3BP20337 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RAB3BP20337 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB3BP20337 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.3■□□□□ 0.2
RAB3BP20337 AC009053.2-201ENST00000563701 2365 ntBASIC16.3■□□□□ 0.2
RAB3BP20337 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RAB3BP20337 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3BP20337 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
RAB3BP20337 AC012317.2-201ENST00000623305 2251 ntBASIC16.3■□□□□ 0.2
RAB3BP20337 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3BP20337 AC112777.1-201ENST00000540175 1423 ntBASIC16.3■□□□□ 0.2
RAB3BP20337 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3BP20337 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3BP20337 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3BP20337 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3BP20337 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3BP20337 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
RAB3BP20337 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.3■□□□□ 0.2
RAB3BP20337 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3BP20337 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.3■□□□□ 0.2
RAB3BP20337 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
RAB3BP20337 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.3■□□□□ 0.2
RAB3BP20337 AC068587.9-201ENST00000641814 219 ntBASIC16.3■□□□□ 0.2
RAB3BP20337 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3BP20337 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.3■□□□□ 0.2
RAB3BP20337 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.3■□□□□ 0.2
RAB3BP20337 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3BP20337 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.3■□□□□ 0.2
RAB3BP20337 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
RAB3BP20337 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3BP20337 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3BP20337 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3BP20337 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3BP20337 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
RAB3BP20337 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3BP20337 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
RAB3BP20337 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3BP20337 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3BP20337 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3BP20337 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3BP20337 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3BP20337 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3BP20337 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RAB3BP20337 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3BP20337 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.29■□□□□ 0.2
RAB3BP20337 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3BP20337 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.29■□□□□ 0.2
RAB3BP20337 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB3BP20337 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3BP20337 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3BP20337 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
RAB3BP20337 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3BP20337 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3BP20337 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3BP20337 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3BP20337 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3BP20337 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB3BP20337 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms