Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.23■□□□□ 0.35
UBL4AP11441 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.23■□□□□ 0.35
UBL4AP11441 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBL4AP11441 AC068587.9-201ENST00000641814 219 ntBASIC17.23■□□□□ 0.35
UBL4AP11441 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBL4AP11441 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBL4AP11441 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBL4AP11441 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBL4AP11441 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBL4AP11441 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.23■□□□□ 0.35
UBL4AP11441 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
UBL4AP11441 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBL4AP11441 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBL4AP11441 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBL4AP11441 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
UBL4AP11441 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBL4AP11441 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UBL4AP11441 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.22■□□□□ 0.35
UBL4AP11441 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UBL4AP11441 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBL4AP11441 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
UBL4AP11441 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBL4AP11441 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBL4AP11441 RCC2P3-201ENST00000418112 1537 ntBASIC17.22■□□□□ 0.35
UBL4AP11441 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
UBL4AP11441 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UBL4AP11441 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBL4AP11441 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.22■□□□□ 0.35
UBL4AP11441 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBL4AP11441 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBL4AP11441 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
UBL4AP11441 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.22■□□□□ 0.35
UBL4AP11441 AL138781.2-201ENST00000617896 1843 ntBASIC17.22■□□□□ 0.35
UBL4AP11441 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBL4AP11441 TNRC18P3-201ENST00000441896 2691 ntBASIC17.22■□□□□ 0.35
UBL4AP11441 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.22■□□□□ 0.35
UBL4AP11441 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBL4AP11441 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBL4AP11441 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
UBL4AP11441 AL355075.4-201ENST00000554988 638 ntBASIC17.22■□□□□ 0.35
UBL4AP11441 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.22■□□□□ 0.35
UBL4AP11441 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.22■□□□□ 0.35
UBL4AP11441 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.22■□□□□ 0.35
UBL4AP11441 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
UBL4AP11441 AC079598.2-202ENST00000546624 1451 ntBASIC17.22■□□□□ 0.35
UBL4AP11441 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
UBL4AP11441 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBL4AP11441 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBL4AP11441 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBL4AP11441 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.22■□□□□ 0.35
UBL4AP11441 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UBL4AP11441 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBL4AP11441 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.22■□□□□ 0.35
UBL4AP11441 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
UBL4AP11441 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.21■□□□□ 0.35
UBL4AP11441 ANO7L1-203ENST00000602586 1720 ntBASIC17.21■□□□□ 0.35
UBL4AP11441 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.21■□□□□ 0.35
UBL4AP11441 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBL4AP11441 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBL4AP11441 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBL4AP11441 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBL4AP11441 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.21■□□□□ 0.35
UBL4AP11441 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBL4AP11441 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBL4AP11441 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBL4AP11441 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.21■□□□□ 0.35
UBL4AP11441 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBL4AP11441 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBL4AP11441 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
UBL4AP11441 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.21■□□□□ 0.35
UBL4AP11441 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.21■□□□□ 0.35
UBL4AP11441 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.21■□□□□ 0.35
UBL4AP11441 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
UBL4AP11441 AC066615.1-201ENST00000640911 628 ntBASIC17.21■□□□□ 0.35
UBL4AP11441 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
UBL4AP11441 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
UBL4AP11441 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
UBL4AP11441 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.21■□□□□ 0.35
UBL4AP11441 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBL4AP11441 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.21■□□□□ 0.35
UBL4AP11441 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBL4AP11441 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.21■□□□□ 0.35
UBL4AP11441 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
UBL4AP11441 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.21■□□□□ 0.34
UBL4AP11441 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBL4AP11441 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBL4AP11441 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBL4AP11441 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.2■□□□□ 0.34
UBL4AP11441 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.2■□□□□ 0.34
UBL4AP11441 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.2■□□□□ 0.34
UBL4AP11441 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBL4AP11441 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBL4AP11441 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBL4AP11441 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
UBL4AP11441 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
UBL4AP11441 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBL4AP11441 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBL4AP11441 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.2■□□□□ 0.34
UBL4AP11441 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBL4AP11441 MIR1238-201ENST00000408483 83 ntBASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms