Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 KRT8P8-201ENST00000434750 1448 ntBASIC18.68■□□□□ 0.58
THRAP10827 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.68■□□□□ 0.58
THRAP10827 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
THRAP10827 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
THRAP10827 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
THRAP10827 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.68■□□□□ 0.58
THRAP10827 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.68■□□□□ 0.58
THRAP10827 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
THRAP10827 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
THRAP10827 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
THRAP10827 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
THRAP10827 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
THRAP10827 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
THRAP10827 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
THRAP10827 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
THRAP10827 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.68■□□□□ 0.58
THRAP10827 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.68■□□□□ 0.58
THRAP10827 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
THRAP10827 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
THRAP10827 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
THRAP10827 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
THRAP10827 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
THRAP10827 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
THRAP10827 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
THRAP10827 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
THRAP10827 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
THRAP10827 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
THRAP10827 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.67■□□□□ 0.58
THRAP10827 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
THRAP10827 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.67■□□□□ 0.58
THRAP10827 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
THRAP10827 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
THRAP10827 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
THRAP10827 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
THRAP10827 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
THRAP10827 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.67■□□□□ 0.58
THRAP10827 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
THRAP10827 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
THRAP10827 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.67■□□□□ 0.58
THRAP10827 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
THRAP10827 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
THRAP10827 AC008040.2-201ENST00000461049 708 ntBASIC18.67■□□□□ 0.58
THRAP10827 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.67■□□□□ 0.58
THRAP10827 SLC25A1P4-201ENST00000567977 778 ntBASIC18.67■□□□□ 0.58
THRAP10827 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
THRAP10827 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
THRAP10827 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.67■□□□□ 0.58
THRAP10827 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.67■□□□□ 0.58
THRAP10827 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
THRAP10827 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
THRAP10827 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
THRAP10827 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
THRAP10827 AL354751.1-201ENST00000412768 1863 ntBASIC18.67■□□□□ 0.58
THRAP10827 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
THRAP10827 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
THRAP10827 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
THRAP10827 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
THRAP10827 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
THRAP10827 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
THRAP10827 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
THRAP10827 FP475955.4-201ENST00000623131 1990 ntBASIC18.66■□□□□ 0.58
THRAP10827 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
THRAP10827 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
THRAP10827 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
THRAP10827 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.66■□□□□ 0.58
THRAP10827 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
THRAP10827 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
THRAP10827 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
THRAP10827 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
THRAP10827 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.66■□□□□ 0.58
THRAP10827 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.66■□□□□ 0.58
THRAP10827 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.66■□□□□ 0.58
THRAP10827 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
THRAP10827 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.66■□□□□ 0.58
THRAP10827 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.66■□□□□ 0.58
THRAP10827 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
THRAP10827 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
THRAP10827 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
THRAP10827 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
THRAP10827 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
THRAP10827 AL133373.2-201ENST00000623187 2828 ntBASIC18.66■□□□□ 0.58
THRAP10827 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
THRAP10827 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.66■□□□□ 0.58
THRAP10827 AC096733.2-201ENST00000609937 1394 ntBASIC18.66■□□□□ 0.58
THRAP10827 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
THRAP10827 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
THRAP10827 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.65■□□□□ 0.58
THRAP10827 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
THRAP10827 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
THRAP10827 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.65■□□□□ 0.58
THRAP10827 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
THRAP10827 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.65■□□□□ 0.58
THRAP10827 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
THRAP10827 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
THRAP10827 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
THRAP10827 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
THRAP10827 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.65■□□□□ 0.58
THRAP10827 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
THRAP10827 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
THRAP10827 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms