Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGHV3-43DP0DP04 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGHV3-43DP0DP04 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.49■□□□□ 0.07
IGHV3-43DP0DP04 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGHV3-43DP0DP04 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
IGHV3-43DP0DP04 RPS2P55-201ENST00000397318 883 ntBASIC15.49■□□□□ 0.07
IGHV3-43DP0DP04 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGHV3-43DP0DP04 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGHV3-43DP0DP04 AC107956.1-201ENST00000494359 873 ntBASIC15.49■□□□□ 0.07
IGHV3-43DP0DP04 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGHV3-43DP0DP04 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
IGHV3-43DP0DP04 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC15.49■□□□□ 0.07
IGHV3-43DP0DP04 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.49■□□□□ 0.07
IGHV3-43DP0DP04 AC113410.3-201ENST00000623366 203 ntBASIC15.49■□□□□ 0.07
IGHV3-43DP0DP04 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
IGHV3-43DP0DP04 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGHV3-43DP0DP04 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGHV3-43DP0DP04 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGHV3-43DP0DP04 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
IGHV3-43DP0DP04 KRT8P3-201ENST00000519669 1449 ntBASIC15.49■□□□□ 0.07
IGHV3-43DP0DP04 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
IGHV3-43DP0DP04 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGHV3-43DP0DP04 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.49■□□□□ 0.07
IGHV3-43DP0DP04 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGHV3-43DP0DP04 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGHV3-43DP0DP04 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IGHV3-43DP0DP04 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
IGHV3-43DP0DP04 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 SLC25A1P4-201ENST00000567977 778 ntBASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 AC068587.9-201ENST00000641814 219 ntBASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 RCC2P3-201ENST00000418112 1537 ntBASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
IGHV3-43DP0DP04 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IGHV3-43DP0DP04 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.47■□□□□ 0.07
IGHV3-43DP0DP04 KRT8P32-201ENST00000512863 1461 ntBASIC15.47■□□□□ 0.07
IGHV3-43DP0DP04 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.47■□□□□ 0.07
IGHV3-43DP0DP04 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
IGHV3-43DP0DP04 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC15.47■□□□□ 0.07
IGHV3-43DP0DP04 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.47■□□□□ 0.07
IGHV3-43DP0DP04 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
IGHV3-43DP0DP04 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
IGHV3-43DP0DP04 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
IGHV3-43DP0DP04 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
IGHV3-43DP0DP04 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
IGHV3-43DP0DP04 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
IGHV3-43DP0DP04 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.47■□□□□ 0.07
IGHV3-43DP0DP04 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.47■□□□□ 0.07
IGHV3-43DP0DP04 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IGHV3-43DP0DP04 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.47■□□□□ 0.07
IGHV3-43DP0DP04 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
IGHV3-43DP0DP04 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IGHV3-43DP0DP04 NUDT16P1-203ENST00000513809 620 ntBASIC15.47■□□□□ 0.07
IGHV3-43DP0DP04 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.47■□□□□ 0.07
IGHV3-43DP0DP04 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
IGHV3-43DP0DP04 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.47■□□□□ 0.07
IGHV3-43DP0DP04 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC15.47■□□□□ 0.07
IGHV3-43DP0DP04 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC15.47■□□□□ 0.07
IGHV3-43DP0DP04 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.47■□□□□ 0.07
IGHV3-43DP0DP04 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC15.47■□□□□ 0.07
IGHV3-43DP0DP04 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.47■□□□□ 0.07
IGHV3-43DP0DP04 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IGHV3-43DP0DP04 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms