Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.17■□□□□ 0.98
TPM2P07951 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.17■□□□□ 0.98
TPM2P07951 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TPM2P07951 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.17■□□□□ 0.98
TPM2P07951 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.17■□□□□ 0.98
TPM2P07951 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
TPM2P07951 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TPM2P07951 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
TPM2P07951 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.17■□□□□ 0.98
TPM2P07951 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TPM2P07951 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TPM2P07951 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TPM2P07951 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC21.17■□□□□ 0.98
TPM2P07951 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TPM2P07951 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
TPM2P07951 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TPM2P07951 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TPM2P07951 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC21.16■□□□□ 0.98
TPM2P07951 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TPM2P07951 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TPM2P07951 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TPM2P07951 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
TPM2P07951 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
TPM2P07951 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TPM2P07951 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TPM2P07951 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TPM2P07951 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TPM2P07951 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TPM2P07951 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TPM2P07951 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TPM2P07951 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.16■□□□□ 0.98
TPM2P07951 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TPM2P07951 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.16■□□□□ 0.98
TPM2P07951 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.16■□□□□ 0.98
TPM2P07951 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.16■□□□□ 0.98
TPM2P07951 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.16■□□□□ 0.98
TPM2P07951 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TPM2P07951 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TPM2P07951 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
TPM2P07951 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TPM2P07951 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TPM2P07951 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC21.16■□□□□ 0.98
TPM2P07951 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TPM2P07951 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
TPM2P07951 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TPM2P07951 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TPM2P07951 GNAS-203ENST00000306120 1878 ntBASIC21.15■□□□□ 0.98
TPM2P07951 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TPM2P07951 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TPM2P07951 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TPM2P07951 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
TPM2P07951 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.15■□□□□ 0.98
TPM2P07951 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.15■□□□□ 0.98
TPM2P07951 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TPM2P07951 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TPM2P07951 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TPM2P07951 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
TPM2P07951 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TPM2P07951 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TPM2P07951 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.15■□□□□ 0.98
TPM2P07951 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.15■□□□□ 0.98
TPM2P07951 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.15■□□□□ 0.98
TPM2P07951 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.15■□□□□ 0.98
TPM2P07951 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
TPM2P07951 AC104417.2-201ENST00000562989 1793 ntBASIC21.15■□□□□ 0.98
TPM2P07951 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TPM2P07951 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TPM2P07951 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TPM2P07951 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TPM2P07951 AD000864.1-201ENST00000624076 2295 ntBASIC21.15■□□□□ 0.98
TPM2P07951 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TPM2P07951 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.14■□□□□ 0.98
TPM2P07951 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
TPM2P07951 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TPM2P07951 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TPM2P07951 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TPM2P07951 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
TPM2P07951 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TPM2P07951 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
TPM2P07951 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
TPM2P07951 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TPM2P07951 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.14■□□□□ 0.97
TPM2P07951 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.14■□□□□ 0.97
TPM2P07951 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.14■□□□□ 0.97
TPM2P07951 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.14■□□□□ 0.97
TPM2P07951 AC060766.5-201ENST00000590539 871 ntBASIC21.14■□□□□ 0.97
TPM2P07951 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.97
TPM2P07951 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
TPM2P07951 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
TPM2P07951 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.14■□□□□ 0.97
TPM2P07951 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TPM2P07951 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TPM2P07951 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TPM2P07951 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TPM2P07951 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC21.13■□□□□ 0.97
TPM2P07951 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TPM2P07951 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TPM2P07951 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
TPM2P07951 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
TPM2P07951 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms