Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
APOA4P06727 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
APOA4P06727 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
APOA4P06727 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
APOA4P06727 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
APOA4P06727 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
APOA4P06727 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
APOA4P06727 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.69■□□□□ 0.58
APOA4P06727 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
APOA4P06727 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
APOA4P06727 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
APOA4P06727 ABALON-201ENST00000629058 1903 ntBASIC18.69■□□□□ 0.58
APOA4P06727 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
APOA4P06727 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
APOA4P06727 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.69■□□□□ 0.58
APOA4P06727 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.69■□□□□ 0.58
APOA4P06727 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.69■□□□□ 0.58
APOA4P06727 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.69■□□□□ 0.58
APOA4P06727 CKBP1-201ENST00000565489 1086 ntBASIC18.69■□□□□ 0.58
APOA4P06727 SLC25A1P4-201ENST00000567977 778 ntBASIC18.69■□□□□ 0.58
APOA4P06727 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.69■□□□□ 0.58
APOA4P06727 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
APOA4P06727 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.69■□□□□ 0.58
APOA4P06727 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
APOA4P06727 AC026471.1-201ENST00000564629 3026 ntBASIC18.69■□□□□ 0.58
APOA4P06727 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
APOA4P06727 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.69■□□□□ 0.58
APOA4P06727 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
APOA4P06727 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.69■□□□□ 0.58
APOA4P06727 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
APOA4P06727 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
APOA4P06727 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
APOA4P06727 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOA4P06727 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOA4P06727 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.68■□□□□ 0.58
APOA4P06727 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.68■□□□□ 0.58
APOA4P06727 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
APOA4P06727 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
APOA4P06727 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOA4P06727 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOA4P06727 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
APOA4P06727 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.68■□□□□ 0.58
APOA4P06727 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
APOA4P06727 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOA4P06727 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOA4P06727 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.68■□□□□ 0.58
APOA4P06727 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
APOA4P06727 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOA4P06727 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
APOA4P06727 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
APOA4P06727 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.68■□□□□ 0.58
APOA4P06727 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOA4P06727 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOA4P06727 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.68■□□□□ 0.58
APOA4P06727 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOA4P06727 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.68■□□□□ 0.58
APOA4P06727 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
APOA4P06727 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
APOA4P06727 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
APOA4P06727 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
APOA4P06727 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
APOA4P06727 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
APOA4P06727 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
APOA4P06727 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
APOA4P06727 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
APOA4P06727 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.67■□□□□ 0.58
APOA4P06727 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APOA4P06727 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APOA4P06727 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APOA4P06727 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
APOA4P06727 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.67■□□□□ 0.58
APOA4P06727 UNC93B2-201ENST00000285383 730 ntBASIC18.67■□□□□ 0.58
APOA4P06727 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.67■□□□□ 0.58
APOA4P06727 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
APOA4P06727 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
APOA4P06727 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.67■□□□□ 0.58
APOA4P06727 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.67■□□□□ 0.58
APOA4P06727 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.67■□□□□ 0.58
APOA4P06727 AC097488.1-201ENST00000507834 756 ntBASIC18.67■□□□□ 0.58
APOA4P06727 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.67■□□□□ 0.58
APOA4P06727 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
APOA4P06727 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
APOA4P06727 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APOA4P06727 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
APOA4P06727 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.67■□□□□ 0.58
APOA4P06727 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APOA4P06727 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
APOA4P06727 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
APOA4P06727 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.66■□□□□ 0.58
APOA4P06727 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOA4P06727 NOC2LP2-201ENST00000407594 1944 ntBASIC18.66■□□□□ 0.58
APOA4P06727 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOA4P06727 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.66■□□□□ 0.58
APOA4P06727 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
APOA4P06727 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOA4P06727 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOA4P06727 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
APOA4P06727 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.66■□□□□ 0.58
APOA4P06727 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
APOA4P06727 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms