Protein–RNA interactions for Protein: P05204

HMGN2, Non-histone chromosomal protein HMG-17, humanhuman

Known RBP Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P05204 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
HMGN2P05204 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HMGN2P05204 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGN2P05204 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
HMGN2P05204 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGN2P05204 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGN2P05204 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
HMGN2P05204 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HMGN2P05204 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGN2P05204 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
HMGN2P05204 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGN2P05204 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGN2P05204 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HMGN2P05204 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HMGN2P05204 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGN2P05204 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HMGN2P05204 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HMGN2P05204 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.41■□□□□ 0.38
HMGN2P05204 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGN2P05204 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGN2P05204 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
HMGN2P05204 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGN2P05204 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HMGN2P05204 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HMGN2P05204 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.4■□□□□ 0.38
HMGN2P05204 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.4■□□□□ 0.38
HMGN2P05204 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
HMGN2P05204 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGN2P05204 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.4■□□□□ 0.38
HMGN2P05204 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
HMGN2P05204 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGN2P05204 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
HMGN2P05204 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.4■□□□□ 0.38
HMGN2P05204 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.4■□□□□ 0.38
HMGN2P05204 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGN2P05204 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HMGN2P05204 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGN2P05204 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGN2P05204 MCCD1P1-208ENST00000445732 328 ntBASIC17.4■□□□□ 0.38
HMGN2P05204 SNORA78-201ENST00000459373 127 ntBASIC17.4■□□□□ 0.38
HMGN2P05204 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
HMGN2P05204 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.4■□□□□ 0.38
HMGN2P05204 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
HMGN2P05204 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.4■□□□□ 0.38
HMGN2P05204 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGN2P05204 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HMGN2P05204 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGN2P05204 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
HMGN2P05204 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGN2P05204 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGN2P05204 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HMGN2P05204 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HMGN2P05204 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
HMGN2P05204 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
HMGN2P05204 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
HMGN2P05204 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.39■□□□□ 0.38
HMGN2P05204 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGN2P05204 AC079598.2-202ENST00000546624 1451 ntBASIC17.39■□□□□ 0.37
HMGN2P05204 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
HMGN2P05204 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HMGN2P05204 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HMGN2P05204 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGN2P05204 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.39■□□□□ 0.37
HMGN2P05204 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.39■□□□□ 0.37
HMGN2P05204 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HMGN2P05204 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.39■□□□□ 0.37
HMGN2P05204 AP000525.1-201ENST00000608286 694 ntBASIC17.39■□□□□ 0.37
HMGN2P05204 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGN2P05204 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.39■□□□□ 0.37
HMGN2P05204 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGN2P05204 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGN2P05204 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HMGN2P05204 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.39■□□□□ 0.37
HMGN2P05204 AL390961.4-201ENST00000623958 2535 ntBASIC17.39■□□□□ 0.37
HMGN2P05204 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HMGN2P05204 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
HMGN2P05204 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
HMGN2P05204 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGN2P05204 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.38■□□□□ 0.37
HMGN2P05204 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGN2P05204 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
HMGN2P05204 MIR564-202ENST00000385049 94 ntBASIC17.38■□□□□ 0.37
HMGN2P05204 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HMGN2P05204 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.38■□□□□ 0.37
HMGN2P05204 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.38■□□□□ 0.37
HMGN2P05204 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
HMGN2P05204 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.38■□□□□ 0.37
HMGN2P05204 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGN2P05204 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
HMGN2P05204 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HMGN2P05204 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGN2P05204 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGN2P05204 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGN2P05204 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGN2P05204 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.38■□□□□ 0.37
HMGN2P05204 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGN2P05204 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HMGN2P05204 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HMGN2P05204 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.38■□□□□ 0.37
HMGN2P05204 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms