Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC27.85■■■□□ 2.05
RAPGEF3O95398 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC27.85■■■□□ 2.05
RAPGEF3O95398 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC27.85■■■□□ 2.05
RAPGEF3O95398 RNA5SP416-201ENST00000516838 111 ntBASIC27.85■■■□□ 2.05
RAPGEF3O95398 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC27.85■■■□□ 2.05
RAPGEF3O95398 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC27.85■■■□□ 2.05
RAPGEF3O95398 AC008735.5-201ENST00000623544 497 ntBASIC27.85■■■□□ 2.05
RAPGEF3O95398 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
RAPGEF3O95398 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC27.85■■■□□ 2.05
RAPGEF3O95398 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
RAPGEF3O95398 TP73-202ENST00000354437 2140 ntTSL 5 BASIC27.85■■■□□ 2.05
RAPGEF3O95398 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
RAPGEF3O95398 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
RAPGEF3O95398 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC27.84■■■□□ 2.05
RAPGEF3O95398 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC27.84■■■□□ 2.05
RAPGEF3O95398 AL357033.4-201ENST00000617703 1807 ntBASIC27.84■■■□□ 2.05
RAPGEF3O95398 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC27.84■■■□□ 2.05
RAPGEF3O95398 AC211486.1-202ENST00000416371 468 ntBASIC27.84■■■□□ 2.05
RAPGEF3O95398 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
RAPGEF3O95398 AC211476.1-201ENST00000503899 468 ntBASIC27.84■■■□□ 2.05
RAPGEF3O95398 AC002347.1-201ENST00000569543 541 ntBASIC27.84■■■□□ 2.05
RAPGEF3O95398 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
RAPGEF3O95398 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
RAPGEF3O95398 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC27.84■■■□□ 2.05
RAPGEF3O95398 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
RAPGEF3O95398 MED17-221ENST00000639724 2317 ntTSL 5 BASIC27.83■■■□□ 2.05
RAPGEF3O95398 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC27.83■■■□□ 2.05
RAPGEF3O95398 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC27.83■■■□□ 2.05
RAPGEF3O95398 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC27.83■■■□□ 2.05
RAPGEF3O95398 RAB17-203ENST00000409576 466 ntTSL 3 BASIC27.83■■■□□ 2.05
RAPGEF3O95398 MEG3-211ENST00000452514 461 ntTSL 3 BASIC27.83■■■□□ 2.05
RAPGEF3O95398 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC27.83■■■□□ 2.05
RAPGEF3O95398 AC009533.2-201ENST00000543664 586 ntBASIC27.83■■■□□ 2.05
RAPGEF3O95398 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC27.83■■■□□ 2.05
RAPGEF3O95398 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC27.83■■■□□ 2.05
RAPGEF3O95398 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
RAPGEF3O95398 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC27.83■■■□□ 2.05
RAPGEF3O95398 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC27.83■■■□□ 2.05
RAPGEF3O95398 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC27.83■■■□□ 2.05
RAPGEF3O95398 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
RAPGEF3O95398 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC27.83■■■□□ 2.04
RAPGEF3O95398 AP002414.3-201ENST00000589352 1468 ntBASIC27.83■■■□□ 2.04
RAPGEF3O95398 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
RAPGEF3O95398 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
RAPGEF3O95398 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
RAPGEF3O95398 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC27.82■■■□□ 2.04
RAPGEF3O95398 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
RAPGEF3O95398 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
RAPGEF3O95398 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
RAPGEF3O95398 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
RAPGEF3O95398 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC27.82■■■□□ 2.04
RAPGEF3O95398 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC27.82■■■□□ 2.04
RAPGEF3O95398 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC27.82■■■□□ 2.04
RAPGEF3O95398 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
RAPGEF3O95398 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC27.82■■■□□ 2.04
RAPGEF3O95398 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC27.82■■■□□ 2.04
RAPGEF3O95398 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC27.81■■■□□ 2.04
RAPGEF3O95398 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC27.81■■■□□ 2.04
RAPGEF3O95398 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC27.81■■■□□ 2.04
RAPGEF3O95398 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
RAPGEF3O95398 DDT-206ENST00000430101 573 ntTSL 2 BASIC27.81■■■□□ 2.04
RAPGEF3O95398 HTR5BP-201ENST00000430851 1154 ntBASIC27.81■■■□□ 2.04
RAPGEF3O95398 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC27.81■■■□□ 2.04
RAPGEF3O95398 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC27.81■■■□□ 2.04
RAPGEF3O95398 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
RAPGEF3O95398 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC27.81■■■□□ 2.04
RAPGEF3O95398 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
RAPGEF3O95398 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC27.81■■■□□ 2.04
RAPGEF3O95398 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
RAPGEF3O95398 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
RAPGEF3O95398 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
RAPGEF3O95398 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
RAPGEF3O95398 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC27.8■■■□□ 2.04
RAPGEF3O95398 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC27.8■■■□□ 2.04
RAPGEF3O95398 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC27.8■■■□□ 2.04
RAPGEF3O95398 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC27.8■■■□□ 2.04
RAPGEF3O95398 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC27.8■■■□□ 2.04
RAPGEF3O95398 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC27.8■■■□□ 2.04
RAPGEF3O95398 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC27.8■■■□□ 2.04
RAPGEF3O95398 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC27.8■■■□□ 2.04
RAPGEF3O95398 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC27.8■■■□□ 2.04
RAPGEF3O95398 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
RAPGEF3O95398 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC27.8■■■□□ 2.04
RAPGEF3O95398 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
RAPGEF3O95398 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
RAPGEF3O95398 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
RAPGEF3O95398 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC27.8■■■□□ 2.04
RAPGEF3O95398 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
RAPGEF3O95398 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC27.8■■■□□ 2.04
RAPGEF3O95398 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC27.8■■■□□ 2.04
RAPGEF3O95398 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
RAPGEF3O95398 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
RAPGEF3O95398 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC27.79■■■□□ 2.04
RAPGEF3O95398 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC27.79■■■□□ 2.04
RAPGEF3O95398 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
RAPGEF3O95398 Z82202.1-201ENST00000623446 1880 ntBASIC27.79■■■□□ 2.04
RAPGEF3O95398 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
RAPGEF3O95398 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC27.79■■■□□ 2.04
RAPGEF3O95398 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC27.79■■■□□ 2.04
RAPGEF3O95398 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC27.79■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms