Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
PTCD1O75127 AP005901.3-202ENST00000581653 237 ntBASIC23.88■■□□□ 1.41
PTCD1O75127 AC068587.9-201ENST00000641814 219 ntBASIC23.88■■□□□ 1.41
PTCD1O75127 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC23.88■■□□□ 1.41
PTCD1O75127 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC23.88■■□□□ 1.41
PTCD1O75127 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PTCD1O75127 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC23.87■■□□□ 1.41
PTCD1O75127 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC23.87■■□□□ 1.41
PTCD1O75127 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PTCD1O75127 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PTCD1O75127 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC23.87■■□□□ 1.41
PTCD1O75127 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PTCD1O75127 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PTCD1O75127 REEP1-209ENST00000541910 969 ntTSL 2 BASIC23.87■■□□□ 1.41
PTCD1O75127 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PTCD1O75127 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC23.87■■□□□ 1.41
PTCD1O75127 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC23.87■■□□□ 1.41
PTCD1O75127 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC23.87■■□□□ 1.41
PTCD1O75127 CALM3-211ENST00000598871 561 ntTSL 4 BASIC23.87■■□□□ 1.41
PTCD1O75127 AL121912.1-201ENST00000603683 238 ntBASIC23.87■■□□□ 1.41
PTCD1O75127 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
PTCD1O75127 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PTCD1O75127 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PTCD1O75127 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC23.87■■□□□ 1.41
PTCD1O75127 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
PTCD1O75127 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
PTCD1O75127 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC23.86■■□□□ 1.41
PTCD1O75127 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PTCD1O75127 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
PTCD1O75127 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC23.86■■□□□ 1.41
PTCD1O75127 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
PTCD1O75127 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
PTCD1O75127 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PTCD1O75127 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC23.86■■□□□ 1.41
PTCD1O75127 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC23.86■■□□□ 1.41
PTCD1O75127 GUSBP12-201ENST00000513727 720 ntBASIC23.86■■□□□ 1.41
PTCD1O75127 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC23.86■■□□□ 1.41
PTCD1O75127 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC23.86■■□□□ 1.41
PTCD1O75127 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC23.86■■□□□ 1.41
PTCD1O75127 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
PTCD1O75127 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
PTCD1O75127 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
PTCD1O75127 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
PTCD1O75127 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PTCD1O75127 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PTCD1O75127 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PTCD1O75127 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PTCD1O75127 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC23.85■■□□□ 1.41
PTCD1O75127 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
PTCD1O75127 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC23.85■■□□□ 1.41
PTCD1O75127 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PTCD1O75127 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PTCD1O75127 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PTCD1O75127 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PTCD1O75127 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PTCD1O75127 POLI-202ENST00000406285 2030 ntTSL 2 BASIC23.85■■□□□ 1.41
PTCD1O75127 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PTCD1O75127 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
PTCD1O75127 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PTCD1O75127 ABR-204ENST00000543210 1049 ntTSL 2 BASIC23.85■■□□□ 1.41
PTCD1O75127 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
PTCD1O75127 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC23.85■■□□□ 1.41
PTCD1O75127 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
PTCD1O75127 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC23.85■■□□□ 1.41
PTCD1O75127 AC073130.3-201ENST00000624389 2278 ntBASIC23.85■■□□□ 1.41
PTCD1O75127 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTCD1O75127 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTCD1O75127 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC23.84■■□□□ 1.41
PTCD1O75127 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTCD1O75127 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PTCD1O75127 AL353692.3-201ENST00000407031 1396 ntBASIC23.84■■□□□ 1.41
PTCD1O75127 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTCD1O75127 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTCD1O75127 AKR1C7P-201ENST00000305623 895 ntBASIC23.84■■□□□ 1.41
PTCD1O75127 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTCD1O75127 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTCD1O75127 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTCD1O75127 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC23.84■■□□□ 1.41
PTCD1O75127 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC23.84■■□□□ 1.41
PTCD1O75127 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC23.84■■□□□ 1.41
PTCD1O75127 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC23.84■■□□□ 1.41
PTCD1O75127 AC106795.1-205ENST00000512851 1056 ntBASIC23.84■■□□□ 1.41
PTCD1O75127 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC23.84■■□□□ 1.41
PTCD1O75127 PPOX-214ENST00000535223 664 ntTSL 3 BASIC23.84■■□□□ 1.41
PTCD1O75127 FICD-205ENST00000552758 603 ntTSL 2 BASIC23.84■■□□□ 1.41
PTCD1O75127 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC23.84■■□□□ 1.41
PTCD1O75127 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTCD1O75127 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC23.84■■□□□ 1.41
PTCD1O75127 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTCD1O75127 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
PTCD1O75127 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
PTCD1O75127 NSUN5P1-202ENST00000421140 1535 ntBASIC23.84■■□□□ 1.41
PTCD1O75127 NSUN5P2-203ENST00000457352 1529 ntBASIC23.84■■□□□ 1.41
PTCD1O75127 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC23.84■■□□□ 1.41
PTCD1O75127 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
PTCD1O75127 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PTCD1O75127 Z98044.1-201ENST00000632503 1764 ntBASIC23.83■■□□□ 1.41
PTCD1O75127 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PTCD1O75127 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC23.83■■□□□ 1.41
PTCD1O75127 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms