Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNRC18O15417 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNRC18O15417 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNRC18O15417 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TNRC18O15417 AC004449.1-201ENST00000564240 433 ntBASIC20.19■□□□□ 0.82
TNRC18O15417 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
TNRC18O15417 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNRC18O15417 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
TNRC18O15417 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
TNRC18O15417 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
TNRC18O15417 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNRC18O15417 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNRC18O15417 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TNRC18O15417 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNRC18O15417 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.19■□□□□ 0.82
TNRC18O15417 INGX-202ENST00000489074 768 ntBASIC20.19■□□□□ 0.82
TNRC18O15417 IFT20-216ENST00000588477 774 ntTSL 5 BASIC20.19■□□□□ 0.82
TNRC18O15417 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TNRC18O15417 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.18■□□□□ 0.82
TNRC18O15417 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
TNRC18O15417 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNRC18O15417 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNRC18O15417 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TNRC18O15417 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC20.18■□□□□ 0.82
TNRC18O15417 DUX4L27-201ENST00000554796 1261 ntBASIC20.18■□□□□ 0.82
TNRC18O15417 NAA60-208ENST00000570819 833 ntTSL 2 BASIC20.18■□□□□ 0.82
TNRC18O15417 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.18■□□□□ 0.82
TNRC18O15417 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNRC18O15417 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.18■□□□□ 0.82
TNRC18O15417 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TNRC18O15417 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC20.18■□□□□ 0.82
TNRC18O15417 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC20.18■□□□□ 0.82
TNRC18O15417 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.18■□□□□ 0.82
TNRC18O15417 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.18■□□□□ 0.82
TNRC18O15417 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
TNRC18O15417 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.18■□□□□ 0.82
TNRC18O15417 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNRC18O15417 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TNRC18O15417 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNRC18O15417 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TNRC18O15417 FAM207CP-201ENST00000443486 507 ntBASIC20.17■□□□□ 0.82
TNRC18O15417 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC20.17■□□□□ 0.82
TNRC18O15417 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.17■□□□□ 0.82
TNRC18O15417 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNRC18O15417 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNRC18O15417 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TNRC18O15417 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.17■□□□□ 0.82
TNRC18O15417 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TNRC18O15417 KRT89P-201ENST00000620027 1478 ntBASIC20.17■□□□□ 0.82
TNRC18O15417 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
TNRC18O15417 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNRC18O15417 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.17■□□□□ 0.82
TNRC18O15417 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TNRC18O15417 AC025678.2-201ENST00000562061 970 ntBASIC20.16■□□□□ 0.82
TNRC18O15417 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.16■□□□□ 0.82
TNRC18O15417 SRP9-204ENST00000619790 377 ntTSL 2 BASIC20.16■□□□□ 0.82
TNRC18O15417 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TNRC18O15417 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TNRC18O15417 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TNRC18O15417 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TNRC18O15417 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC20.16■□□□□ 0.82
TNRC18O15417 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC20.16■□□□□ 0.82
TNRC18O15417 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.16■□□□□ 0.82
TNRC18O15417 AC015911.4-201ENST00000588022 1070 ntBASIC20.16■□□□□ 0.82
TNRC18O15417 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TNRC18O15417 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.16■□□□□ 0.82
TNRC18O15417 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.16■□□□□ 0.82
TNRC18O15417 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
TNRC18O15417 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.16■□□□□ 0.82
TNRC18O15417 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TNRC18O15417 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TNRC18O15417 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TNRC18O15417 AC104417.2-201ENST00000562989 1793 ntBASIC20.16■□□□□ 0.82
TNRC18O15417 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TNRC18O15417 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC20.16■□□□□ 0.82
TNRC18O15417 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TNRC18O15417 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.16■□□□□ 0.82
TNRC18O15417 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.16■□□□□ 0.82
TNRC18O15417 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC20.16■□□□□ 0.82
TNRC18O15417 LINC00628-201ENST00000628516 1289 ntBASIC20.16■□□□□ 0.82
TNRC18O15417 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TNRC18O15417 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TNRC18O15417 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC20.15■□□□□ 0.82
TNRC18O15417 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.15■□□□□ 0.82
TNRC18O15417 RAC2-204ENST00000406508 893 ntTSL 5 BASIC20.15■□□□□ 0.82
TNRC18O15417 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC20.15■□□□□ 0.82
TNRC18O15417 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TNRC18O15417 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.15■□□□□ 0.82
TNRC18O15417 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TNRC18O15417 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TNRC18O15417 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.15■□□□□ 0.82
TNRC18O15417 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TNRC18O15417 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.15■□□□□ 0.82
TNRC18O15417 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.15■□□□□ 0.82
TNRC18O15417 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.15■□□□□ 0.82
TNRC18O15417 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.15■□□□□ 0.82
TNRC18O15417 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.15■□□□□ 0.82
TNRC18O15417 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TNRC18O15417 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.14■□□□□ 0.82
TNRC18O15417 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms