Protein–RNA interactions for Protein: O15111

CHUK, Inhibitor of nuclear factor kappa-B kinase subunit alpha, humanhuman

Predictions only

Length 745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHUKO15111 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHUKO15111 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHUKO15111 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHUKO15111 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CHUKO15111 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.18■□□□□ 0.66
CHUKO15111 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC19.18■□□□□ 0.66
CHUKO15111 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.17■□□□□ 0.66
CHUKO15111 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CHUKO15111 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.17■□□□□ 0.66
CHUKO15111 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHUKO15111 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHUKO15111 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHUKO15111 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.17■□□□□ 0.66
CHUKO15111 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHUKO15111 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CHUKO15111 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
CHUKO15111 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CHUKO15111 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHUKO15111 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHUKO15111 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHUKO15111 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHUKO15111 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.17■□□□□ 0.66
CHUKO15111 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CHUKO15111 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.17■□□□□ 0.66
CHUKO15111 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHUKO15111 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.17■□□□□ 0.66
CHUKO15111 MIR4785-201ENST00000585005 73 ntBASIC19.17■□□□□ 0.66
CHUKO15111 HLA-A-209ENST00000638375 975 ntBASIC19.17■□□□□ 0.66
CHUKO15111 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.17■□□□□ 0.66
CHUKO15111 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHUKO15111 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHUKO15111 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.17■□□□□ 0.66
CHUKO15111 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHUKO15111 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHUKO15111 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CHUKO15111 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CHUKO15111 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHUKO15111 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHUKO15111 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHUKO15111 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHUKO15111 KRT16P1-201ENST00000399124 1418 ntBASIC19.17■□□□□ 0.66
CHUKO15111 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CHUKO15111 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CHUKO15111 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.16■□□□□ 0.66
CHUKO15111 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.16■□□□□ 0.66
CHUKO15111 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHUKO15111 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CHUKO15111 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHUKO15111 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CHUKO15111 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHUKO15111 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHUKO15111 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHUKO15111 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHUKO15111 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CHUKO15111 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHUKO15111 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.16■□□□□ 0.66
CHUKO15111 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHUKO15111 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.16■□□□□ 0.66
CHUKO15111 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.16■□□□□ 0.66
CHUKO15111 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.16■□□□□ 0.66
CHUKO15111 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHUKO15111 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.16■□□□□ 0.66
CHUKO15111 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.16■□□□□ 0.66
CHUKO15111 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.16■□□□□ 0.66
CHUKO15111 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHUKO15111 CR392000.1-201ENST00000624770 1228 ntBASIC19.16■□□□□ 0.66
CHUKO15111 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHUKO15111 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHUKO15111 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHUKO15111 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHUKO15111 KRT17P2-201ENST00000300992 1314 ntBASIC19.16■□□□□ 0.66
CHUKO15111 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHUKO15111 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CHUKO15111 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHUKO15111 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHUKO15111 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.16■□□□□ 0.66
CHUKO15111 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
CHUKO15111 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHUKO15111 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.16■□□□□ 0.66
CHUKO15111 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHUKO15111 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHUKO15111 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHUKO15111 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.15■□□□□ 0.66
CHUKO15111 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHUKO15111 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
CHUKO15111 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.15■□□□□ 0.66
CHUKO15111 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHUKO15111 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHUKO15111 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHUKO15111 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.15■□□□□ 0.66
CHUKO15111 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHUKO15111 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHUKO15111 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHUKO15111 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.15■□□□□ 0.66
CHUKO15111 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHUKO15111 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.15■□□□□ 0.66
CHUKO15111 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHUKO15111 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CHUKO15111 AC026471.5-201ENST00000615068 467 ntBASIC19.15■□□□□ 0.66
CHUKO15111 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms