Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN4O14493 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN4O14493 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN4O14493 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN4O14493 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN4O14493 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN4O14493 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.55■□□□□ 0.4
CLDN4O14493 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CLDN4O14493 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
CLDN4O14493 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CLDN4O14493 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN4O14493 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
CLDN4O14493 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN4O14493 MTMR9LP-203ENST00000426597 1545 ntBASIC17.54■□□□□ 0.4
CLDN4O14493 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN4O14493 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.54■□□□□ 0.4
CLDN4O14493 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.54■□□□□ 0.4
CLDN4O14493 KRT18P57-201ENST00000443599 1254 ntBASIC17.54■□□□□ 0.4
CLDN4O14493 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN4O14493 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.54■□□□□ 0.4
CLDN4O14493 COX11P1-201ENST00000489116 835 ntBASIC17.54■□□□□ 0.4
CLDN4O14493 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CLDN4O14493 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.54■□□□□ 0.4
CLDN4O14493 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.54■□□□□ 0.4
CLDN4O14493 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
CLDN4O14493 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN4O14493 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CLDN4O14493 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDN4O14493 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN4O14493 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
CLDN4O14493 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN4O14493 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CLDN4O14493 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDN4O14493 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.54■□□□□ 0.4
CLDN4O14493 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.54■□□□□ 0.4
CLDN4O14493 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN4O14493 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.53■□□□□ 0.4
CLDN4O14493 Z98044.1-201ENST00000632503 1764 ntBASIC17.53■□□□□ 0.4
CLDN4O14493 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN4O14493 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN4O14493 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN4O14493 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.53■□□□□ 0.4
CLDN4O14493 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.53■□□□□ 0.4
CLDN4O14493 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN4O14493 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN4O14493 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CLDN4O14493 RCN1P1-201ENST00000400413 996 ntBASIC17.53■□□□□ 0.4
CLDN4O14493 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN4O14493 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN4O14493 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CLDN4O14493 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN4O14493 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN4O14493 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN4O14493 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.53■□□□□ 0.4
CLDN4O14493 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN4O14493 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN4O14493 KRT18P21-201ENST00000515767 1272 ntBASIC17.53■□□□□ 0.4
CLDN4O14493 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
CLDN4O14493 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.53■□□□□ 0.4
CLDN4O14493 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.53■□□□□ 0.4
CLDN4O14493 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.53■□□□□ 0.4
CLDN4O14493 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CLDN4O14493 AC112497.1-201ENST00000624824 639 ntBASIC17.53■□□□□ 0.4
CLDN4O14493 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CLDN4O14493 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN4O14493 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CLDN4O14493 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN4O14493 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN4O14493 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN4O14493 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CLDN4O14493 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.52■□□□□ 0.4
CLDN4O14493 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN4O14493 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN4O14493 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CLDN4O14493 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.52■□□□□ 0.4
CLDN4O14493 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN4O14493 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN4O14493 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN4O14493 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.52■□□□□ 0.4
CLDN4O14493 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN4O14493 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN4O14493 TMPOP1-202ENST00000424642 1267 ntBASIC17.52■□□□□ 0.4
CLDN4O14493 KRT18P23-201ENST00000435622 1283 ntBASIC17.52■□□□□ 0.4
CLDN4O14493 FAM210CP-201ENST00000445714 574 ntBASIC17.52■□□□□ 0.4
CLDN4O14493 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.52■□□□□ 0.4
CLDN4O14493 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.52■□□□□ 0.4
CLDN4O14493 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN4O14493 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.52■□□□□ 0.4
CLDN4O14493 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.52■□□□□ 0.4
CLDN4O14493 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN4O14493 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN4O14493 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.52■□□□□ 0.4
CLDN4O14493 HOXB1-202ENST00000577092 1414 ntBASIC17.52■□□□□ 0.4
CLDN4O14493 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CLDN4O14493 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN4O14493 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN4O14493 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CLDN4O14493 AC093525.10-201ENST00000625130 1569 ntBASIC17.52■□□□□ 0.39
CLDN4O14493 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLDN4O14493 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms