Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.85■□□□□ 0.77
O00370 WWOX-216ENST00000569818 525 ntBASIC19.85■□□□□ 0.77
O00370 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.85■□□□□ 0.77
O00370 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
O00370 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
O00370 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
O00370 AC036111.1-201ENST00000533973 1582 ntBASIC19.85■□□□□ 0.77
O00370 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
O00370 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
O00370 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.85■□□□□ 0.77
O00370 Z98044.1-201ENST00000632503 1764 ntBASIC19.85■□□□□ 0.77
O00370 AC007613.1-201ENST00000572811 2597 ntBASIC19.85■□□□□ 0.77
O00370 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
O00370 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.84■□□□□ 0.77
O00370 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
O00370 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
O00370 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
O00370 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
O00370 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
O00370 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
O00370 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.84■□□□□ 0.77
O00370 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
O00370 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.84■□□□□ 0.77
O00370 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
O00370 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.84■□□□□ 0.77
O00370 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
O00370 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.84■□□□□ 0.77
O00370 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
O00370 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
O00370 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.84■□□□□ 0.77
O00370 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
O00370 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
O00370 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
O00370 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
O00370 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
O00370 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.84■□□□□ 0.77
O00370 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.83■□□□□ 0.77
O00370 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
O00370 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.83■□□□□ 0.77
O00370 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
O00370 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
O00370 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
O00370 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
O00370 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
O00370 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
O00370 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
O00370 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.83■□□□□ 0.77
O00370 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.83■□□□□ 0.77
O00370 ANO7L1-203ENST00000602586 1720 ntBASIC19.83■□□□□ 0.77
O00370 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.83■□□□□ 0.77
O00370 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
O00370 MIR564-202ENST00000385049 94 ntBASIC19.83■□□□□ 0.77
O00370 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
O00370 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
O00370 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.83■□□□□ 0.77
O00370 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.83■□□□□ 0.77
O00370 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
O00370 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
O00370 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.83■□□□□ 0.77
O00370 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.83■□□□□ 0.77
O00370 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.83■□□□□ 0.77
O00370 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.83■□□□□ 0.77
O00370 LINC01023-201ENST00000606054 436 ntBASIC19.83■□□□□ 0.77
O00370 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
O00370 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
O00370 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
O00370 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
O00370 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
O00370 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.83■□□□□ 0.76
O00370 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
O00370 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
O00370 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
O00370 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
O00370 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
O00370 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
O00370 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.82■□□□□ 0.76
O00370 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
O00370 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
O00370 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
O00370 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
O00370 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
O00370 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.82■□□□□ 0.76
O00370 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
O00370 ECEL1P3-201ENST00000427961 737 ntBASIC19.82■□□□□ 0.76
O00370 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.82■□□□□ 0.76
O00370 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.82■□□□□ 0.76
O00370 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.82■□□□□ 0.76
O00370 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
O00370 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
O00370 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
O00370 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
O00370 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.82■□□□□ 0.76
O00370 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
O00370 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
O00370 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.82■□□□□ 0.76
O00370 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
O00370 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
O00370 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
O00370 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.82■□□□□ 0.76
O00370 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms