Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.99■□□□□ 0.95
SPDYE4A6NLX3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.99■□□□□ 0.95
SPDYE4A6NLX3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.99■□□□□ 0.95
SPDYE4A6NLX3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.99■□□□□ 0.95
SPDYE4A6NLX3 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
SPDYE4A6NLX3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPDYE4A6NLX3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPDYE4A6NLX3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPDYE4A6NLX3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.98■□□□□ 0.95
SPDYE4A6NLX3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPDYE4A6NLX3 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPDYE4A6NLX3 NIFKP9-201ENST00000419265 221 ntBASIC20.98■□□□□ 0.95
SPDYE4A6NLX3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.98■□□□□ 0.95
SPDYE4A6NLX3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.98■□□□□ 0.95
SPDYE4A6NLX3 AL691432.2-201ENST00000607222 2038 ntBASIC20.98■□□□□ 0.95
SPDYE4A6NLX3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPDYE4A6NLX3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SPDYE4A6NLX3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SPDYE4A6NLX3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPDYE4A6NLX3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPDYE4A6NLX3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.98■□□□□ 0.95
SPDYE4A6NLX3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SPDYE4A6NLX3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPDYE4A6NLX3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPDYE4A6NLX3 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPDYE4A6NLX3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPDYE4A6NLX3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPDYE4A6NLX3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.97■□□□□ 0.95
SPDYE4A6NLX3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.97■□□□□ 0.95
SPDYE4A6NLX3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPDYE4A6NLX3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SPDYE4A6NLX3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPDYE4A6NLX3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.97■□□□□ 0.95
SPDYE4A6NLX3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPDYE4A6NLX3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPDYE4A6NLX3 AC113347.1-201ENST00000413321 391 ntBASIC20.97■□□□□ 0.95
SPDYE4A6NLX3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.97■□□□□ 0.95
SPDYE4A6NLX3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.97■□□□□ 0.95
SPDYE4A6NLX3 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.97■□□□□ 0.95
SPDYE4A6NLX3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.97■□□□□ 0.95
SPDYE4A6NLX3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.97■□□□□ 0.95
SPDYE4A6NLX3 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.97■□□□□ 0.95
SPDYE4A6NLX3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPDYE4A6NLX3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPDYE4A6NLX3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.97■□□□□ 0.95
SPDYE4A6NLX3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.97■□□□□ 0.95
SPDYE4A6NLX3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.97■□□□□ 0.95
SPDYE4A6NLX3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPDYE4A6NLX3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPDYE4A6NLX3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SPDYE4A6NLX3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SPDYE4A6NLX3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPDYE4A6NLX3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SPDYE4A6NLX3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPDYE4A6NLX3 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPDYE4A6NLX3 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.96■□□□□ 0.95
SPDYE4A6NLX3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPDYE4A6NLX3 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPDYE4A6NLX3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SPDYE4A6NLX3 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.96■□□□□ 0.95
SPDYE4A6NLX3 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.96■□□□□ 0.95
SPDYE4A6NLX3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.96■□□□□ 0.95
SPDYE4A6NLX3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPDYE4A6NLX3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.96■□□□□ 0.95
SPDYE4A6NLX3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.96■□□□□ 0.95
SPDYE4A6NLX3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SPDYE4A6NLX3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
SPDYE4A6NLX3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SPDYE4A6NLX3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
SPDYE4A6NLX3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SPDYE4A6NLX3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SPDYE4A6NLX3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
SPDYE4A6NLX3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.95■□□□□ 0.94
SPDYE4A6NLX3 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPDYE4A6NLX3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.95■□□□□ 0.94
SPDYE4A6NLX3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPDYE4A6NLX3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPDYE4A6NLX3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPDYE4A6NLX3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPDYE4A6NLX3 MYL10-201ENST00000223167 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPDYE4A6NLX3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.95■□□□□ 0.94
SPDYE4A6NLX3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.95■□□□□ 0.94
SPDYE4A6NLX3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.95■□□□□ 0.94
SPDYE4A6NLX3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SPDYE4A6NLX3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.95■□□□□ 0.94
SPDYE4A6NLX3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.95■□□□□ 0.94
SPDYE4A6NLX3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPDYE4A6NLX3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SPDYE4A6NLX3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.94■□□□□ 0.94
SPDYE4A6NLX3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPDYE4A6NLX3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.94■□□□□ 0.94
SPDYE4A6NLX3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.94■□□□□ 0.94
SPDYE4A6NLX3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPDYE4A6NLX3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPDYE4A6NLX3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SPDYE4A6NLX3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SPDYE4A6NLX3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPDYE4A6NLX3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPDYE4A6NLX3 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SPDYE4A6NLX3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms