Protein–RNA interactions for Protein: A6NKL6

TMEM200C, Transmembrane protein 200C, humanhuman

Predictions only

Length 621 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200CA6NKL6 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM200CA6NKL6 AL357033.4-201ENST00000617703 1807 ntBASIC17.24■□□□□ 0.35
TMEM200CA6NKL6 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM200CA6NKL6 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM200CA6NKL6 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TMEM200CA6NKL6 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM200CA6NKL6 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM200CA6NKL6 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM200CA6NKL6 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.24■□□□□ 0.35
TMEM200CA6NKL6 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.24■□□□□ 0.35
TMEM200CA6NKL6 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.24■□□□□ 0.35
TMEM200CA6NKL6 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.24■□□□□ 0.35
TMEM200CA6NKL6 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.24■□□□□ 0.35
TMEM200CA6NKL6 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.24■□□□□ 0.35
TMEM200CA6NKL6 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.24■□□□□ 0.35
TMEM200CA6NKL6 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM200CA6NKL6 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM200CA6NKL6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM200CA6NKL6 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.24■□□□□ 0.35
TMEM200CA6NKL6 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.24■□□□□ 0.35
TMEM200CA6NKL6 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.24■□□□□ 0.35
TMEM200CA6NKL6 AC083906.6-201ENST00000641366 219 ntBASIC17.24■□□□□ 0.35
TMEM200CA6NKL6 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM200CA6NKL6 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.24■□□□□ 0.35
TMEM200CA6NKL6 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM200CA6NKL6 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
TMEM200CA6NKL6 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM200CA6NKL6 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.24■□□□□ 0.35
TMEM200CA6NKL6 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM200CA6NKL6 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM200CA6NKL6 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.23■□□□□ 0.35
TMEM200CA6NKL6 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM200CA6NKL6 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM200CA6NKL6 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM200CA6NKL6 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM200CA6NKL6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM200CA6NKL6 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.23■□□□□ 0.35
TMEM200CA6NKL6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM200CA6NKL6 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.23■□□□□ 0.35
TMEM200CA6NKL6 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM200CA6NKL6 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM200CA6NKL6 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM200CA6NKL6 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM200CA6NKL6 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TMEM200CA6NKL6 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.23■□□□□ 0.35
TMEM200CA6NKL6 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM200CA6NKL6 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM200CA6NKL6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
TMEM200CA6NKL6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.23■□□□□ 0.35
TMEM200CA6NKL6 STARP1-201ENST00000397973 869 ntBASIC17.23■□□□□ 0.35
TMEM200CA6NKL6 AL031133.1-201ENST00000406807 723 ntBASIC17.23■□□□□ 0.35
TMEM200CA6NKL6 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM200CA6NKL6 SPDYE15P-201ENST00000424157 909 ntBASIC17.23■□□□□ 0.35
TMEM200CA6NKL6 AL359075.1-203ENST00000462729 1002 ntBASIC17.23■□□□□ 0.35
TMEM200CA6NKL6 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM200CA6NKL6 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.23■□□□□ 0.35
TMEM200CA6NKL6 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.23■□□□□ 0.35
TMEM200CA6NKL6 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.23■□□□□ 0.35
TMEM200CA6NKL6 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.23■□□□□ 0.35
TMEM200CA6NKL6 AC112497.1-201ENST00000624824 639 ntBASIC17.23■□□□□ 0.35
TMEM200CA6NKL6 AC006333.2-201ENST00000607957 2099 ntBASIC17.23■□□□□ 0.35
TMEM200CA6NKL6 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM200CA6NKL6 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM200CA6NKL6 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TMEM200CA6NKL6 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM200CA6NKL6 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM200CA6NKL6 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM200CA6NKL6 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.23■□□□□ 0.35
TMEM200CA6NKL6 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM200CA6NKL6 HOXB1-202ENST00000577092 1414 ntBASIC17.22■□□□□ 0.35
TMEM200CA6NKL6 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TMEM200CA6NKL6 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.22■□□□□ 0.35
TMEM200CA6NKL6 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TMEM200CA6NKL6 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM200CA6NKL6 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM200CA6NKL6 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM200CA6NKL6 TNXA-203ENST00000507684 2038 ntBASIC17.22■□□□□ 0.35
TMEM200CA6NKL6 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM200CA6NKL6 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM200CA6NKL6 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM200CA6NKL6 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM200CA6NKL6 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TMEM200CA6NKL6 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM200CA6NKL6 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.22■□□□□ 0.35
TMEM200CA6NKL6 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.22■□□□□ 0.35
TMEM200CA6NKL6 AC092647.4-201ENST00000457211 535 ntBASIC17.22■□□□□ 0.35
TMEM200CA6NKL6 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TMEM200CA6NKL6 LINC01238-205ENST00000567549 1107 ntBASIC17.22■□□□□ 0.35
TMEM200CA6NKL6 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.22■□□□□ 0.35
TMEM200CA6NKL6 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.22■□□□□ 0.35
TMEM200CA6NKL6 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
TMEM200CA6NKL6 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.22■□□□□ 0.35
TMEM200CA6NKL6 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM200CA6NKL6 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.22■□□□□ 0.35
TMEM200CA6NKL6 HYMAI.1-201ENST00000620949 238 ntBASIC17.22■□□□□ 0.35
TMEM200CA6NKL6 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.22■□□□□ 0.35
TMEM200CA6NKL6 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM200CA6NKL6 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM200CA6NKL6 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM200CA6NKL6 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms