Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TMEM88BA6NKF7 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC21.61■■□□□ 1.05
TMEM88BA6NKF7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC21.61■■□□□ 1.05
TMEM88BA6NKF7 AC064836.3-201ENST00000607928 673 ntBASIC21.61■■□□□ 1.05
TMEM88BA6NKF7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TMEM88BA6NKF7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC21.61■■□□□ 1.05
TMEM88BA6NKF7 AC107918.4-202ENST00000641623 219 ntBASIC21.61■■□□□ 1.05
TMEM88BA6NKF7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TMEM88BA6NKF7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TMEM88BA6NKF7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TMEM88BA6NKF7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.61■■□□□ 1.05
TMEM88BA6NKF7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TMEM88BA6NKF7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TMEM88BA6NKF7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
TMEM88BA6NKF7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.6■■□□□ 1.05
TMEM88BA6NKF7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TMEM88BA6NKF7 PTMS-202ENST00000389462 773 ntTSL 2 BASIC21.6■■□□□ 1.05
TMEM88BA6NKF7 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC21.6■■□□□ 1.05
TMEM88BA6NKF7 PNKD-204ENST00000436005 978 ntTSL 5 BASIC21.6■■□□□ 1.05
TMEM88BA6NKF7 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
TMEM88BA6NKF7 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TMEM88BA6NKF7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
TMEM88BA6NKF7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC21.6■■□□□ 1.05
TMEM88BA6NKF7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC21.6■■□□□ 1.05
TMEM88BA6NKF7 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC21.6■■□□□ 1.05
TMEM88BA6NKF7 AL139288.1-201ENST00000623748 933 ntBASIC21.6■■□□□ 1.05
TMEM88BA6NKF7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TMEM88BA6NKF7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TMEM88BA6NKF7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.6■■□□□ 1.05
TMEM88BA6NKF7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
TMEM88BA6NKF7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC21.59■■□□□ 1.05
TMEM88BA6NKF7 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.59■■□□□ 1.05
TMEM88BA6NKF7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC21.59■■□□□ 1.05
TMEM88BA6NKF7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TMEM88BA6NKF7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TMEM88BA6NKF7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TMEM88BA6NKF7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TMEM88BA6NKF7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
TMEM88BA6NKF7 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
TMEM88BA6NKF7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TMEM88BA6NKF7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TMEM88BA6NKF7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC21.59■■□□□ 1.05
TMEM88BA6NKF7 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC21.59■■□□□ 1.05
TMEM88BA6NKF7 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC21.59■■□□□ 1.05
TMEM88BA6NKF7 AL096865.1-201ENST00000606796 927 ntBASIC21.59■■□□□ 1.05
TMEM88BA6NKF7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC21.59■■□□□ 1.05
TMEM88BA6NKF7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.59■■□□□ 1.05
TMEM88BA6NKF7 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
TMEM88BA6NKF7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
TMEM88BA6NKF7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC21.59■■□□□ 1.05
TMEM88BA6NKF7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TMEM88BA6NKF7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TMEM88BA6NKF7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TMEM88BA6NKF7 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC21.58■■□□□ 1.05
TMEM88BA6NKF7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.58■■□□□ 1.05
TMEM88BA6NKF7 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TMEM88BA6NKF7 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TMEM88BA6NKF7 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TMEM88BA6NKF7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
TMEM88BA6NKF7 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC21.58■■□□□ 1.05
TMEM88BA6NKF7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TMEM88BA6NKF7 BCRP1-201ENST00000444246 691 ntBASIC21.58■■□□□ 1.05
TMEM88BA6NKF7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC21.58■■□□□ 1.05
TMEM88BA6NKF7 ALG1L5P-201ENST00000482043 771 ntBASIC21.58■■□□□ 1.05
TMEM88BA6NKF7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC21.58■■□□□ 1.05
TMEM88BA6NKF7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC21.58■■□□□ 1.05
TMEM88BA6NKF7 MTDHP4-201ENST00000600287 670 ntBASIC21.58■■□□□ 1.05
TMEM88BA6NKF7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.58■■□□□ 1.04
TMEM88BA6NKF7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TMEM88BA6NKF7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TMEM88BA6NKF7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC21.57■■□□□ 1.04
TMEM88BA6NKF7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.57■■□□□ 1.04
TMEM88BA6NKF7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TMEM88BA6NKF7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TMEM88BA6NKF7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
TMEM88BA6NKF7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TMEM88BA6NKF7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TMEM88BA6NKF7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TMEM88BA6NKF7 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC21.57■■□□□ 1.04
TMEM88BA6NKF7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC21.57■■□□□ 1.04
TMEM88BA6NKF7 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.57■■□□□ 1.04
TMEM88BA6NKF7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC21.57■■□□□ 1.04
TMEM88BA6NKF7 AC011467.2-201ENST00000598425 242 ntBASIC21.57■■□□□ 1.04
TMEM88BA6NKF7 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC21.57■■□□□ 1.04
TMEM88BA6NKF7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TMEM88BA6NKF7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TMEM88BA6NKF7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
TMEM88BA6NKF7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TMEM88BA6NKF7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TMEM88BA6NKF7 AL162377.1-201ENST00000618844 1793 ntBASIC21.56■■□□□ 1.04
TMEM88BA6NKF7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TMEM88BA6NKF7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TMEM88BA6NKF7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.56■■□□□ 1.04
TMEM88BA6NKF7 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TMEM88BA6NKF7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.56■■□□□ 1.04
TMEM88BA6NKF7 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
TMEM88BA6NKF7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC21.56■■□□□ 1.04
TMEM88BA6NKF7 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
TMEM88BA6NKF7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TMEM88BA6NKF7 AC092474.2-201ENST00000424288 719 ntBASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms