Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 AC004854.2-201ENST00000608450 1441 ntBASIC13.25□□□□□ -0.29
LINC01549A6NIU2 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 AC069236.1-201ENST00000604339 616 ntBASIC13.25□□□□□ -0.29
LINC01549A6NIU2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC01549A6NIU2 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 RAP2CP1-201ENST00000605103 478 ntBASIC13.24□□□□□ -0.29
LINC01549A6NIU2 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 SNAI3-AS1-205ENST00000568633 2096 ntBASIC13.24□□□□□ -0.29
LINC01549A6NIU2 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01549A6NIU2 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01549A6NIU2 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC13.23□□□□□ -0.29
LINC01549A6NIU2 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
LINC01549A6NIU2 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01549A6NIU2 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
LINC01549A6NIU2 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01549A6NIU2 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01549A6NIU2 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01549A6NIU2 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01549A6NIU2 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01549A6NIU2 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01549A6NIU2 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01549A6NIU2 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC13.23□□□□□ -0.29
LINC01549A6NIU2 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
LINC01549A6NIU2 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms