Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CAPN8A6NHC0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN8A6NHC0 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CAPN8A6NHC0 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN8A6NHC0 KRT8P32-201ENST00000512863 1461 ntBASIC18.89■□□□□ 0.61
CAPN8A6NHC0 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN8A6NHC0 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN8A6NHC0 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CAPN8A6NHC0 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CAPN8A6NHC0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.88■□□□□ 0.61
CAPN8A6NHC0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN8A6NHC0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CAPN8A6NHC0 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN8A6NHC0 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.88■□□□□ 0.61
CAPN8A6NHC0 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CAPN8A6NHC0 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.88■□□□□ 0.61
CAPN8A6NHC0 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CAPN8A6NHC0 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN8A6NHC0 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN8A6NHC0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CAPN8A6NHC0 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN8A6NHC0 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.88■□□□□ 0.61
CAPN8A6NHC0 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.88■□□□□ 0.61
CAPN8A6NHC0 AL023284.2-201ENST00000405850 579 ntBASIC18.88■□□□□ 0.61
CAPN8A6NHC0 HMGA1P5-201ENST00000412453 271 ntBASIC18.88■□□□□ 0.61
CAPN8A6NHC0 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.88■□□□□ 0.61
CAPN8A6NHC0 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.88■□□□□ 0.61
CAPN8A6NHC0 SLC25A3P1-201ENST00000443844 931 ntBASIC18.88■□□□□ 0.61
CAPN8A6NHC0 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
CAPN8A6NHC0 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.88■□□□□ 0.61
CAPN8A6NHC0 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN8A6NHC0 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.88■□□□□ 0.61
CAPN8A6NHC0 RCC2P3-201ENST00000418112 1537 ntBASIC18.88■□□□□ 0.61
CAPN8A6NHC0 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN8A6NHC0 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN8A6NHC0 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN8A6NHC0 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN8A6NHC0 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN8A6NHC0 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN8A6NHC0 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.88■□□□□ 0.61
CAPN8A6NHC0 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CAPN8A6NHC0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN8A6NHC0 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN8A6NHC0 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN8A6NHC0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CAPN8A6NHC0 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.87■□□□□ 0.61
CAPN8A6NHC0 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN8A6NHC0 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN8A6NHC0 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN8A6NHC0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN8A6NHC0 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN8A6NHC0 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN8A6NHC0 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN8A6NHC0 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN8A6NHC0 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN8A6NHC0 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN8A6NHC0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN8A6NHC0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.87■□□□□ 0.61
CAPN8A6NHC0 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.87■□□□□ 0.61
CAPN8A6NHC0 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN8A6NHC0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
CAPN8A6NHC0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CAPN8A6NHC0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.87■□□□□ 0.61
CAPN8A6NHC0 AC083906.6-201ENST00000641366 219 ntBASIC18.87■□□□□ 0.61
CAPN8A6NHC0 FZD10-202ENST00000539839 3282 ntBASIC18.87■□□□□ 0.61
CAPN8A6NHC0 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN8A6NHC0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CAPN8A6NHC0 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN8A6NHC0 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN8A6NHC0 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN8A6NHC0 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN8A6NHC0 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CAPN8A6NHC0 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN8A6NHC0 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN8A6NHC0 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN8A6NHC0 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN8A6NHC0 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.86■□□□□ 0.61
CAPN8A6NHC0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN8A6NHC0 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN8A6NHC0 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.86■□□□□ 0.61
CAPN8A6NHC0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CAPN8A6NHC0 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CAPN8A6NHC0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.86■□□□□ 0.61
CAPN8A6NHC0 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CAPN8A6NHC0 MCCD1P1-208ENST00000445732 328 ntBASIC18.86■□□□□ 0.61
CAPN8A6NHC0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CAPN8A6NHC0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.86■□□□□ 0.61
CAPN8A6NHC0 AC091076.1-201ENST00000610741 619 ntBASIC18.86■□□□□ 0.61
CAPN8A6NHC0 AC068587.9-201ENST00000641814 219 ntBASIC18.86■□□□□ 0.61
CAPN8A6NHC0 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.86■□□□□ 0.61
CAPN8A6NHC0 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN8A6NHC0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN8A6NHC0 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.86■□□□□ 0.61
CAPN8A6NHC0 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CAPN8A6NHC0 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.86■□□□□ 0.61
CAPN8A6NHC0 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN8A6NHC0 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN8A6NHC0 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN8A6NHC0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CAPN8A6NHC0 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms