Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 AC007967.2-201ENST00000432613 625 ntBASIC17.74■□□□□ 0.43
CNOT1A5YKK6 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.74■□□□□ 0.43
CNOT1A5YKK6 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.74■□□□□ 0.43
CNOT1A5YKK6 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.74■□□□□ 0.43
CNOT1A5YKK6 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.74■□□□□ 0.43
CNOT1A5YKK6 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CNOT1A5YKK6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNOT1A5YKK6 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.74■□□□□ 0.43
CNOT1A5YKK6 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNOT1A5YKK6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CNOT1A5YKK6 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNOT1A5YKK6 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CNOT1A5YKK6 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CNOT1A5YKK6 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNOT1A5YKK6 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.74■□□□□ 0.43
CNOT1A5YKK6 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.74■□□□□ 0.43
CNOT1A5YKK6 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CNOT1A5YKK6 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.74■□□□□ 0.43
CNOT1A5YKK6 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.74■□□□□ 0.43
CNOT1A5YKK6 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CNOT1A5YKK6 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNOT1A5YKK6 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNOT1A5YKK6 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNOT1A5YKK6 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CNOT1A5YKK6 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT1A5YKK6 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CNOT1A5YKK6 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT1A5YKK6 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT1A5YKK6 AC034236.2-201ENST00000606662 1610 ntBASIC17.73■□□□□ 0.43
CNOT1A5YKK6 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT1A5YKK6 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT1A5YKK6 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT1A5YKK6 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.73■□□□□ 0.43
CNOT1A5YKK6 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.73■□□□□ 0.43
CNOT1A5YKK6 MIR3180-4-201ENST00000582223 153 ntBASIC17.73■□□□□ 0.43
CNOT1A5YKK6 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT1A5YKK6 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT1A5YKK6 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT1A5YKK6 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CNOT1A5YKK6 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT1A5YKK6 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.73■□□□□ 0.43
CNOT1A5YKK6 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT1A5YKK6 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.73■□□□□ 0.43
CNOT1A5YKK6 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT1A5YKK6 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT1A5YKK6 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.73■□□□□ 0.43
CNOT1A5YKK6 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CNOT1A5YKK6 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT1A5YKK6 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.73■□□□□ 0.43
CNOT1A5YKK6 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT1A5YKK6 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.73■□□□□ 0.43
CNOT1A5YKK6 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.73■□□□□ 0.43
CNOT1A5YKK6 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.73■□□□□ 0.43
CNOT1A5YKK6 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.73■□□□□ 0.43
CNOT1A5YKK6 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.72■□□□□ 0.43
CNOT1A5YKK6 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT1A5YKK6 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CNOT1A5YKK6 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT1A5YKK6 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
CNOT1A5YKK6 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CNOT1A5YKK6 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT1A5YKK6 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT1A5YKK6 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.72■□□□□ 0.43
CNOT1A5YKK6 AC079834.2-201ENST00000609776 1949 ntBASIC17.72■□□□□ 0.43
CNOT1A5YKK6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.72■□□□□ 0.43
CNOT1A5YKK6 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.72■□□□□ 0.43
CNOT1A5YKK6 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT1A5YKK6 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.72■□□□□ 0.43
CNOT1A5YKK6 UNC93B6-202ENST00000528242 690 ntBASIC17.72■□□□□ 0.43
CNOT1A5YKK6 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.72■□□□□ 0.43
CNOT1A5YKK6 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.72■□□□□ 0.43
CNOT1A5YKK6 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT1A5YKK6 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CNOT1A5YKK6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT1A5YKK6 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT1A5YKK6 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.72■□□□□ 0.43
CNOT1A5YKK6 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.72■□□□□ 0.43
CNOT1A5YKK6 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT1A5YKK6 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT1A5YKK6 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT1A5YKK6 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
CNOT1A5YKK6 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CNOT1A5YKK6 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT1A5YKK6 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.72■□□□□ 0.43
CNOT1A5YKK6 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CNOT1A5YKK6 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
CNOT1A5YKK6 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.72■□□□□ 0.43
CNOT1A5YKK6 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.72■□□□□ 0.43
CNOT1A5YKK6 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT1A5YKK6 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.72■□□□□ 0.43
CNOT1A5YKK6 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT1A5YKK6 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT1A5YKK6 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT1A5YKK6 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT1A5YKK6 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT1A5YKK6 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT1A5YKK6 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.71■□□□□ 0.43
CNOT1A5YKK6 AC002310.6-201ENST00000624451 1377 ntBASIC17.71■□□□□ 0.43
CNOT1A5YKK6 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT1A5YKK6 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms