Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 AL390961.4-201ENST00000623958 2535 ntBASIC16.47■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.46■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 AC020763.4-201ENST00000623414 4170 ntBASIC16.46■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 AC092338.2-201ENST00000568827 1415 ntBASIC16.46■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.46■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.46■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.46■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.46■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.46■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.46■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.46■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.46■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.46■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IGKV1D-43A0A0B4J1Z2 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.45■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.45■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 SLC25A1P2-201ENST00000430693 912 ntBASIC16.45■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 KRT18P41-201ENST00000518924 1277 ntBASIC16.45■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.45■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.45■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.45■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 MYLKP1-201ENST00000509077 1580 ntBASIC16.45■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.45■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.45■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.45■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.44■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.44■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.44■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 AC007663.1-201ENST00000438948 1240 ntBASIC16.44■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.44■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 MIR3180-5-201ENST00000583743 153 ntBASIC16.44■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 AC010947.1-201ENST00000623454 693 ntBASIC16.44■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.44■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.44■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.43■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.43■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 AC018470.1-201ENST00000624790 3129 ntBASIC16.43■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.43■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.43■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.43■□□□□ 0.22
IGKV1D-43A0A0B4J1Z2 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms