Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-7A0A0A0MS04 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-7A0A0A0MS04 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRBV6-7A0A0A0MS04 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC15.61■□□□□ 0.09
TRBV6-7A0A0A0MS04 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC15.61■□□□□ 0.09
TRBV6-7A0A0A0MS04 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
TRBV6-7A0A0A0MS04 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC15.61■□□□□ 0.09
TRBV6-7A0A0A0MS04 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-7A0A0A0MS04 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-7A0A0A0MS04 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-7A0A0A0MS04 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-7A0A0A0MS04 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.6■□□□□ 0.09
TRBV6-7A0A0A0MS04 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-7A0A0A0MS04 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-7A0A0A0MS04 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-7A0A0A0MS04 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-7A0A0A0MS04 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TRBV6-7A0A0A0MS04 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.6■□□□□ 0.09
TRBV6-7A0A0A0MS04 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-7A0A0A0MS04 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-7A0A0A0MS04 MTMR9LP-203ENST00000426597 1545 ntBASIC15.6■□□□□ 0.09
TRBV6-7A0A0A0MS04 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-7A0A0A0MS04 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-7A0A0A0MS04 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC15.6■□□□□ 0.09
TRBV6-7A0A0A0MS04 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC15.6■□□□□ 0.09
TRBV6-7A0A0A0MS04 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-7A0A0A0MS04 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC15.6■□□□□ 0.09
TRBV6-7A0A0A0MS04 AC068587.9-201ENST00000641814 219 ntBASIC15.6■□□□□ 0.09
TRBV6-7A0A0A0MS04 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TRBV6-7A0A0A0MS04 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-7A0A0A0MS04 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-7A0A0A0MS04 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-7A0A0A0MS04 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-7A0A0A0MS04 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.6■□□□□ 0.09
TRBV6-7A0A0A0MS04 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TRBV6-7A0A0A0MS04 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC15.6■□□□□ 0.09
TRBV6-7A0A0A0MS04 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-7A0A0A0MS04 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-7A0A0A0MS04 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-7A0A0A0MS04 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-7A0A0A0MS04 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-7A0A0A0MS04 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-7A0A0A0MS04 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TRBV6-7A0A0A0MS04 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.6■□□□□ 0.09
TRBV6-7A0A0A0MS04 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-7A0A0A0MS04 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.6■□□□□ 0.09
TRBV6-7A0A0A0MS04 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV6-7A0A0A0MS04 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TRBV6-7A0A0A0MS04 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-7A0A0A0MS04 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-7A0A0A0MS04 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-7A0A0A0MS04 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TRBV6-7A0A0A0MS04 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-7A0A0A0MS04 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-7A0A0A0MS04 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-7A0A0A0MS04 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-7A0A0A0MS04 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-7A0A0A0MS04 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
TRBV6-7A0A0A0MS04 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-7A0A0A0MS04 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC15.59■□□□□ 0.09
TRBV6-7A0A0A0MS04 AL355802.2-201ENST00000402069 882 ntBASIC15.59■□□□□ 0.09
TRBV6-7A0A0A0MS04 PTPA-216ENST00000432651 857 ntTSL 2 BASIC15.59■□□□□ 0.09
TRBV6-7A0A0A0MS04 AC026366.1-201ENST00000488803 879 ntBASIC15.59■□□□□ 0.09
TRBV6-7A0A0A0MS04 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC15.59■□□□□ 0.09
TRBV6-7A0A0A0MS04 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.59■□□□□ 0.09
TRBV6-7A0A0A0MS04 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-7A0A0A0MS04 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TRBV6-7A0A0A0MS04 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.59■□□□□ 0.09
TRBV6-7A0A0A0MS04 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
TRBV6-7A0A0A0MS04 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-7A0A0A0MS04 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-7A0A0A0MS04 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-7A0A0A0MS04 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-7A0A0A0MS04 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-7A0A0A0MS04 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-7A0A0A0MS04 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-7A0A0A0MS04 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
TRBV6-7A0A0A0MS04 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV6-7A0A0A0MS04 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRBV6-7A0A0A0MS04 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRBV6-7A0A0A0MS04 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV6-7A0A0A0MS04 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV6-7A0A0A0MS04 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
TRBV6-7A0A0A0MS04 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV6-7A0A0A0MS04 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TRBV6-7A0A0A0MS04 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.58■□□□□ 0.08
TRBV6-7A0A0A0MS04 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV6-7A0A0A0MS04 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV6-7A0A0A0MS04 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV6-7A0A0A0MS04 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC15.58■□□□□ 0.08
TRBV6-7A0A0A0MS04 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC15.58■□□□□ 0.08
TRBV6-7A0A0A0MS04 KLF13-207ENST00000560473 489 ntTSL 3 BASIC15.58■□□□□ 0.08
TRBV6-7A0A0A0MS04 AC233263.1-201ENST00000578059 224 ntBASIC15.58■□□□□ 0.08
TRBV6-7A0A0A0MS04 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC15.58■□□□□ 0.08
TRBV6-7A0A0A0MS04 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC15.58■□□□□ 0.08
TRBV6-7A0A0A0MS04 AL445675.2-201ENST00000620291 557 ntBASIC15.58■□□□□ 0.08
TRBV6-7A0A0A0MS04 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV6-7A0A0A0MS04 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.08
TRBV6-7A0A0A0MS04 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV6-7A0A0A0MS04 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms