Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV18A0A075B6X5 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV18A0A075B6X5 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV18A0A075B6X5 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV18A0A075B6X5 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAV18A0A075B6X5 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV18A0A075B6X5 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV18A0A075B6X5 PRORSD1P-202ENST00000563365 2154 ntBASIC16.03■□□□□ 0.16
TRAV18A0A075B6X5 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAV18A0A075B6X5 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV18A0A075B6X5 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRAV18A0A075B6X5 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV18A0A075B6X5 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
TRAV18A0A075B6X5 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV18A0A075B6X5 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TRAV18A0A075B6X5 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV18A0A075B6X5 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV18A0A075B6X5 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAV18A0A075B6X5 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV18A0A075B6X5 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV18A0A075B6X5 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.03■□□□□ 0.16
TRAV18A0A075B6X5 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.03■□□□□ 0.16
TRAV18A0A075B6X5 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRAV18A0A075B6X5 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV18A0A075B6X5 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV18A0A075B6X5 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TRAV18A0A075B6X5 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV18A0A075B6X5 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAV18A0A075B6X5 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV18A0A075B6X5 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
TRAV18A0A075B6X5 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRAV18A0A075B6X5 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV18A0A075B6X5 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV18A0A075B6X5 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV18A0A075B6X5 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV18A0A075B6X5 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV18A0A075B6X5 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TRAV18A0A075B6X5 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.02■□□□□ 0.16
TRAV18A0A075B6X5 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV18A0A075B6X5 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV18A0A075B6X5 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAV18A0A075B6X5 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.02■□□□□ 0.16
TRAV18A0A075B6X5 RCC2P6-201ENST00000526625 1557 ntBASIC16.02■□□□□ 0.16
TRAV18A0A075B6X5 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAV18A0A075B6X5 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV18A0A075B6X5 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAV18A0A075B6X5 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV18A0A075B6X5 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAV18A0A075B6X5 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.02■□□□□ 0.16
TRAV18A0A075B6X5 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAV18A0A075B6X5 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.02■□□□□ 0.16
TRAV18A0A075B6X5 AC105036.2-201ENST00000569468 176 ntBASIC16.02■□□□□ 0.16
TRAV18A0A075B6X5 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAV18A0A075B6X5 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV18A0A075B6X5 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.15
TRAV18A0A075B6X5 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV18A0A075B6X5 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
TRAV18A0A075B6X5 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV18A0A075B6X5 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.02■□□□□ 0.15
TRAV18A0A075B6X5 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.02■□□□□ 0.15
TRAV18A0A075B6X5 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV18A0A075B6X5 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV18A0A075B6X5 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV18A0A075B6X5 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV18A0A075B6X5 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
TRAV18A0A075B6X5 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV18A0A075B6X5 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TRAV18A0A075B6X5 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV18A0A075B6X5 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV18A0A075B6X5 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV18A0A075B6X5 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV18A0A075B6X5 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV18A0A075B6X5 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV18A0A075B6X5 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV18A0A075B6X5 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
TRAV18A0A075B6X5 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAV18A0A075B6X5 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV18A0A075B6X5 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV18A0A075B6X5 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV18A0A075B6X5 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV18A0A075B6X5 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV18A0A075B6X5 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.01■□□□□ 0.15
TRAV18A0A075B6X5 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TRAV18A0A075B6X5 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
TRAV18A0A075B6X5 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAV18A0A075B6X5 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV18A0A075B6X5 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV18A0A075B6X5 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV18A0A075B6X5 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV18A0A075B6X5 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV18A0A075B6X5 AC138028.4-201ENST00000564984 1845 ntBASIC16.01■□□□□ 0.15
TRAV18A0A075B6X5 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV18A0A075B6X5 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV18A0A075B6X5 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV18A0A075B6X5 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16■□□□□ 0.15
TRAV18A0A075B6X5 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV18A0A075B6X5 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16■□□□□ 0.15
TRAV18A0A075B6X5 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV18A0A075B6X5 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV18A0A075B6X5 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms