Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRBV20-1A0A075B6N2 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TRBV20-1A0A075B6N2 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC12.45□□□□□ -0.42
TRBV20-1A0A075B6N2 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRBV20-1A0A075B6N2 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TRBV20-1A0A075B6N2 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRBV20-1A0A075B6N2 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRBV20-1A0A075B6N2 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC12.45□□□□□ -0.42
TRBV20-1A0A075B6N2 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
TRBV20-1A0A075B6N2 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
TRBV20-1A0A075B6N2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TRBV20-1A0A075B6N2 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TRBV20-1A0A075B6N2 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 HARS-201ENST00000307633 1780 ntTSL 2 BASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 BHLHE23-202ENST00000612929 1109 ntBASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 MYB-201ENST00000316528 3571 ntTSL 5 BASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 MYB-241ENST00000616088 3573 ntTSL 5 BASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 AC007326.2-201ENST00000624224 7579 ntBASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 FLJ16779-201ENST00000612722 7638 ntBASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 STK24-203ENST00000397517 4578 ntTSL 2 BASIC12.44□□□□□ -0.42
TRBV20-1A0A075B6N2 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 LINC00602-201ENST00000629776 2065 ntBASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 AC139795.1-202ENST00000500444 432 ntBASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 U85056.1-201ENST00000616429 682 ntBASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 PGR-209ENST00000617858 2816 ntTSL 5 BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRBV20-1A0A075B6N2 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms