Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA6Q9Y5G7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHGA6Q9Y5G7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
PCDHGA6Q9Y5G7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 PCED1CP-201ENST00000419887 785 ntBASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 AC009947.2-201ENST00000444014 672 ntBASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 AL023973.1-201ENST00000624619 620 ntBASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 KRT8P45-201ENST00000414328 1447 ntBASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHGA6Q9Y5G7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 AC104581.1-202ENST00000635932 2618 ntBASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 AL671277.2-201ENST00000458060 996 ntBASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PCDHGA6Q9Y5G7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA6Q9Y5G7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
PCDHGA6Q9Y5G7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGA6Q9Y5G7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGA6Q9Y5G7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGA6Q9Y5G7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA6Q9Y5G7 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA6Q9Y5G7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDHGA6Q9Y5G7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGA6Q9Y5G7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA6Q9Y5G7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA6Q9Y5G7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA6Q9Y5G7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA6Q9Y5G7 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms