Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20■□□□□ 0.79
UBQLN1Q9UMX0 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20■□□□□ 0.79
UBQLN1Q9UMX0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20■□□□□ 0.79
UBQLN1Q9UMX0 AP000550.4-202ENST00000639755 178 ntBASIC20■□□□□ 0.79
UBQLN1Q9UMX0 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20■□□□□ 0.79
UBQLN1Q9UMX0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
UBQLN1Q9UMX0 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
UBQLN1Q9UMX0 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
UBQLN1Q9UMX0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20■□□□□ 0.79
UBQLN1Q9UMX0 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
UBQLN1Q9UMX0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20■□□□□ 0.79
UBQLN1Q9UMX0 AC005332.1-201ENST00000577698 1310 ntBASIC20■□□□□ 0.79
UBQLN1Q9UMX0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBQLN1Q9UMX0 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.99■□□□□ 0.79
UBQLN1Q9UMX0 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBQLN1Q9UMX0 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBQLN1Q9UMX0 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.99■□□□□ 0.79
UBQLN1Q9UMX0 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
UBQLN1Q9UMX0 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.99■□□□□ 0.79
UBQLN1Q9UMX0 VENTXP5-201ENST00000523979 775 ntBASIC19.99■□□□□ 0.79
UBQLN1Q9UMX0 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.99■□□□□ 0.79
UBQLN1Q9UMX0 AC079602.3-201ENST00000623931 403 ntBASIC19.99■□□□□ 0.79
UBQLN1Q9UMX0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.99■□□□□ 0.79
UBQLN1Q9UMX0 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBQLN1Q9UMX0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBQLN1Q9UMX0 KRT8P50-201ENST00000562022 1438 ntBASIC19.99■□□□□ 0.79
UBQLN1Q9UMX0 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.99■□□□□ 0.79
UBQLN1Q9UMX0 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBQLN1Q9UMX0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.98■□□□□ 0.79
UBQLN1Q9UMX0 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBQLN1Q9UMX0 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
UBQLN1Q9UMX0 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.98■□□□□ 0.79
UBQLN1Q9UMX0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBQLN1Q9UMX0 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBQLN1Q9UMX0 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBQLN1Q9UMX0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBQLN1Q9UMX0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
UBQLN1Q9UMX0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
UBQLN1Q9UMX0 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.98■□□□□ 0.79
UBQLN1Q9UMX0 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBQLN1Q9UMX0 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBQLN1Q9UMX0 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBQLN1Q9UMX0 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
UBQLN1Q9UMX0 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
UBQLN1Q9UMX0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.98■□□□□ 0.79
UBQLN1Q9UMX0 AC009065.1-201ENST00000564055 1225 ntBASIC19.98■□□□□ 0.79
UBQLN1Q9UMX0 AL136038.4-201ENST00000603606 1261 ntBASIC19.98■□□□□ 0.79
UBQLN1Q9UMX0 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBQLN1Q9UMX0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
UBQLN1Q9UMX0 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
UBQLN1Q9UMX0 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBQLN1Q9UMX0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
UBQLN1Q9UMX0 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBQLN1Q9UMX0 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBQLN1Q9UMX0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBQLN1Q9UMX0 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBQLN1Q9UMX0 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.97■□□□□ 0.79
UBQLN1Q9UMX0 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBQLN1Q9UMX0 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBQLN1Q9UMX0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBQLN1Q9UMX0 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBQLN1Q9UMX0 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBQLN1Q9UMX0 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBQLN1Q9UMX0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBQLN1Q9UMX0 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBQLN1Q9UMX0 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBQLN1Q9UMX0 SPDYE13P-201ENST00000445314 798 ntBASIC19.97■□□□□ 0.79
UBQLN1Q9UMX0 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBQLN1Q9UMX0 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.97■□□□□ 0.79
UBQLN1Q9UMX0 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.97■□□□□ 0.79
UBQLN1Q9UMX0 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBQLN1Q9UMX0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBQLN1Q9UMX0 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBQLN1Q9UMX0 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
UBQLN1Q9UMX0 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
UBQLN1Q9UMX0 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBQLN1Q9UMX0 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.96■□□□□ 0.79
UBQLN1Q9UMX0 IER3-202ENST00000376377 1350 ntBASIC19.96■□□□□ 0.79
UBQLN1Q9UMX0 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
UBQLN1Q9UMX0 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.96■□□□□ 0.79
UBQLN1Q9UMX0 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBQLN1Q9UMX0 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
UBQLN1Q9UMX0 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.96■□□□□ 0.79
UBQLN1Q9UMX0 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.96■□□□□ 0.79
UBQLN1Q9UMX0 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
UBQLN1Q9UMX0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
UBQLN1Q9UMX0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UBQLN1Q9UMX0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.96■□□□□ 0.79
UBQLN1Q9UMX0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBQLN1Q9UMX0 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
UBQLN1Q9UMX0 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBQLN1Q9UMX0 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.96■□□□□ 0.79
UBQLN1Q9UMX0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBQLN1Q9UMX0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
UBQLN1Q9UMX0 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBQLN1Q9UMX0 HLA-F-220ENST00000434407 884 ntBASIC19.96■□□□□ 0.79
UBQLN1Q9UMX0 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBQLN1Q9UMX0 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.96■□□□□ 0.79
UBQLN1Q9UMX0 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.96■□□□□ 0.79
UBQLN1Q9UMX0 AC116407.4-201ENST00000623319 1061 ntBASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms