Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SALL4Q9UJQ4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.84■□□□□ 0.77
SALL4Q9UJQ4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
SALL4Q9UJQ4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
SALL4Q9UJQ4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SALL4Q9UJQ4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SALL4Q9UJQ4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SALL4Q9UJQ4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SALL4Q9UJQ4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SALL4Q9UJQ4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SALL4Q9UJQ4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SALL4Q9UJQ4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SALL4Q9UJQ4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.84■□□□□ 0.77
SALL4Q9UJQ4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
SALL4Q9UJQ4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SALL4Q9UJQ4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SALL4Q9UJQ4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SALL4Q9UJQ4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SALL4Q9UJQ4 FZD10-202ENST00000539839 3282 ntBASIC19.83■□□□□ 0.77
SALL4Q9UJQ4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SALL4Q9UJQ4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SALL4Q9UJQ4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SALL4Q9UJQ4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SALL4Q9UJQ4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SALL4Q9UJQ4 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SALL4Q9UJQ4 AC091390.4-202ENST00000476426 537 ntBASIC19.83■□□□□ 0.77
SALL4Q9UJQ4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.83■□□□□ 0.77
SALL4Q9UJQ4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.77
SALL4Q9UJQ4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SALL4Q9UJQ4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.83■□□□□ 0.77
SALL4Q9UJQ4 Z99916.2-201ENST00000604037 246 ntBASIC19.83■□□□□ 0.77
SALL4Q9UJQ4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.83■□□□□ 0.77
SALL4Q9UJQ4 AC124016.1-201ENST00000609552 612 ntBASIC19.83■□□□□ 0.77
SALL4Q9UJQ4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
SALL4Q9UJQ4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
SALL4Q9UJQ4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SALL4Q9UJQ4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SALL4Q9UJQ4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SALL4Q9UJQ4 KRT8P45-201ENST00000414328 1447 ntBASIC19.83■□□□□ 0.76
SALL4Q9UJQ4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.83■□□□□ 0.76
SALL4Q9UJQ4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
SALL4Q9UJQ4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
SALL4Q9UJQ4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
SALL4Q9UJQ4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.83■□□□□ 0.76
SALL4Q9UJQ4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SALL4Q9UJQ4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.83■□□□□ 0.76
SALL4Q9UJQ4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.82■□□□□ 0.76
SALL4Q9UJQ4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SALL4Q9UJQ4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SALL4Q9UJQ4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
SALL4Q9UJQ4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SALL4Q9UJQ4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SALL4Q9UJQ4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
SALL4Q9UJQ4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SALL4Q9UJQ4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SALL4Q9UJQ4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.82■□□□□ 0.76
SALL4Q9UJQ4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SALL4Q9UJQ4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SALL4Q9UJQ4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.82■□□□□ 0.76
SALL4Q9UJQ4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SALL4Q9UJQ4 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.82■□□□□ 0.76
SALL4Q9UJQ4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SALL4Q9UJQ4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.82■□□□□ 0.76
SALL4Q9UJQ4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SALL4Q9UJQ4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SALL4Q9UJQ4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SALL4Q9UJQ4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.82■□□□□ 0.76
SALL4Q9UJQ4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.82■□□□□ 0.76
SALL4Q9UJQ4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SALL4Q9UJQ4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SALL4Q9UJQ4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SALL4Q9UJQ4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SALL4Q9UJQ4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.81■□□□□ 0.76
SALL4Q9UJQ4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.81■□□□□ 0.76
SALL4Q9UJQ4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SALL4Q9UJQ4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SALL4Q9UJQ4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SALL4Q9UJQ4 AC239809.2-201ENST00000415381 517 ntBASIC19.81■□□□□ 0.76
SALL4Q9UJQ4 AC008040.2-201ENST00000461049 708 ntBASIC19.81■□□□□ 0.76
SALL4Q9UJQ4 AC133681.1-201ENST00000465482 601 ntBASIC19.81■□□□□ 0.76
SALL4Q9UJQ4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SALL4Q9UJQ4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SALL4Q9UJQ4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SALL4Q9UJQ4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SALL4Q9UJQ4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SALL4Q9UJQ4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SALL4Q9UJQ4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SALL4Q9UJQ4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SALL4Q9UJQ4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SALL4Q9UJQ4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SALL4Q9UJQ4 AC008556.1-201ENST00000610908 2040 ntBASIC19.8■□□□□ 0.76
SALL4Q9UJQ4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SALL4Q9UJQ4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SALL4Q9UJQ4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SALL4Q9UJQ4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SALL4Q9UJQ4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.8■□□□□ 0.76
SALL4Q9UJQ4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.8■□□□□ 0.76
SALL4Q9UJQ4 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SALL4Q9UJQ4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SALL4Q9UJQ4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms