Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VTI1BQ9UEU0 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.36■□□□□ 0.53
VTI1BQ9UEU0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VTI1BQ9UEU0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.36■□□□□ 0.53
VTI1BQ9UEU0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
VTI1BQ9UEU0 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VTI1BQ9UEU0 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.36■□□□□ 0.53
VTI1BQ9UEU0 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.36■□□□□ 0.53
VTI1BQ9UEU0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.36■□□□□ 0.53
VTI1BQ9UEU0 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.36■□□□□ 0.53
VTI1BQ9UEU0 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.36■□□□□ 0.53
VTI1BQ9UEU0 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VTI1BQ9UEU0 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.36■□□□□ 0.53
VTI1BQ9UEU0 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VTI1BQ9UEU0 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VTI1BQ9UEU0 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VTI1BQ9UEU0 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VTI1BQ9UEU0 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.36■□□□□ 0.53
VTI1BQ9UEU0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.36■□□□□ 0.53
VTI1BQ9UEU0 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VTI1BQ9UEU0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VTI1BQ9UEU0 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VTI1BQ9UEU0 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VTI1BQ9UEU0 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
VTI1BQ9UEU0 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VTI1BQ9UEU0 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VTI1BQ9UEU0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.35■□□□□ 0.53
VTI1BQ9UEU0 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VTI1BQ9UEU0 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VTI1BQ9UEU0 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.35■□□□□ 0.53
VTI1BQ9UEU0 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.35■□□□□ 0.53
VTI1BQ9UEU0 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.35■□□□□ 0.53
VTI1BQ9UEU0 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.35■□□□□ 0.53
VTI1BQ9UEU0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.35■□□□□ 0.53
VTI1BQ9UEU0 MYC-208ENST00000641036 567 ntBASIC18.35■□□□□ 0.53
VTI1BQ9UEU0 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
VTI1BQ9UEU0 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VTI1BQ9UEU0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VTI1BQ9UEU0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.35■□□□□ 0.53
VTI1BQ9UEU0 AC008764.6-201ENST00000595909 2069 ntBASIC18.35■□□□□ 0.53
VTI1BQ9UEU0 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VTI1BQ9UEU0 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
VTI1BQ9UEU0 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VTI1BQ9UEU0 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VTI1BQ9UEU0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
VTI1BQ9UEU0 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VTI1BQ9UEU0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
VTI1BQ9UEU0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.35■□□□□ 0.53
VTI1BQ9UEU0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VTI1BQ9UEU0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VTI1BQ9UEU0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
VTI1BQ9UEU0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VTI1BQ9UEU0 RCC2P6-201ENST00000526625 1557 ntBASIC18.34■□□□□ 0.53
VTI1BQ9UEU0 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
VTI1BQ9UEU0 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VTI1BQ9UEU0 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.34■□□□□ 0.53
VTI1BQ9UEU0 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.34■□□□□ 0.53
VTI1BQ9UEU0 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.34■□□□□ 0.53
VTI1BQ9UEU0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VTI1BQ9UEU0 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VTI1BQ9UEU0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VTI1BQ9UEU0 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VTI1BQ9UEU0 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.34■□□□□ 0.53
VTI1BQ9UEU0 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VTI1BQ9UEU0 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VTI1BQ9UEU0 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VTI1BQ9UEU0 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VTI1BQ9UEU0 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
VTI1BQ9UEU0 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.34■□□□□ 0.53
VTI1BQ9UEU0 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.34■□□□□ 0.53
VTI1BQ9UEU0 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.34■□□□□ 0.53
VTI1BQ9UEU0 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VTI1BQ9UEU0 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VTI1BQ9UEU0 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VTI1BQ9UEU0 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.34■□□□□ 0.53
VTI1BQ9UEU0 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.34■□□□□ 0.53
VTI1BQ9UEU0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
VTI1BQ9UEU0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.34■□□□□ 0.53
VTI1BQ9UEU0 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VTI1BQ9UEU0 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VTI1BQ9UEU0 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VTI1BQ9UEU0 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
VTI1BQ9UEU0 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VTI1BQ9UEU0 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VTI1BQ9UEU0 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VTI1BQ9UEU0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
VTI1BQ9UEU0 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
VTI1BQ9UEU0 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
VTI1BQ9UEU0 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
VTI1BQ9UEU0 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
VTI1BQ9UEU0 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VTI1BQ9UEU0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VTI1BQ9UEU0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
VTI1BQ9UEU0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
VTI1BQ9UEU0 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
VTI1BQ9UEU0 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.33■□□□□ 0.52
VTI1BQ9UEU0 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
VTI1BQ9UEU0 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VTI1BQ9UEU0 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
VTI1BQ9UEU0 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms