Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD3Q9UBI1 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.42■□□□□ 0.22
COMMD3Q9UBI1 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.42■□□□□ 0.22
COMMD3Q9UBI1 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
COMMD3Q9UBI1 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD3Q9UBI1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.42■□□□□ 0.22
COMMD3Q9UBI1 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.42■□□□□ 0.22
COMMD3Q9UBI1 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD3Q9UBI1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD3Q9UBI1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.42■□□□□ 0.22
COMMD3Q9UBI1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC16.42■□□□□ 0.22
COMMD3Q9UBI1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.42■□□□□ 0.22
COMMD3Q9UBI1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.42■□□□□ 0.22
COMMD3Q9UBI1 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD3Q9UBI1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.42■□□□□ 0.22
COMMD3Q9UBI1 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD3Q9UBI1 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD3Q9UBI1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD3Q9UBI1 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD3Q9UBI1 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD3Q9UBI1 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD3Q9UBI1 KRT8P8-201ENST00000434750 1448 ntBASIC16.42■□□□□ 0.22
COMMD3Q9UBI1 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.42■□□□□ 0.22
COMMD3Q9UBI1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD3Q9UBI1 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.42■□□□□ 0.22
COMMD3Q9UBI1 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD3Q9UBI1 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
COMMD3Q9UBI1 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.22
COMMD3Q9UBI1 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.42■□□□□ 0.22
COMMD3Q9UBI1 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.42■□□□□ 0.22
COMMD3Q9UBI1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
COMMD3Q9UBI1 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
COMMD3Q9UBI1 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.41■□□□□ 0.22
COMMD3Q9UBI1 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
COMMD3Q9UBI1 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD3Q9UBI1 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD3Q9UBI1 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD3Q9UBI1 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD3Q9UBI1 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD3Q9UBI1 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
COMMD3Q9UBI1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD3Q9UBI1 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD3Q9UBI1 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD3Q9UBI1 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.41■□□□□ 0.22
COMMD3Q9UBI1 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD3Q9UBI1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
COMMD3Q9UBI1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD3Q9UBI1 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD3Q9UBI1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC16.41■□□□□ 0.22
COMMD3Q9UBI1 AL589743.5-201ENST00000616611 1050 ntBASIC16.41■□□□□ 0.22
COMMD3Q9UBI1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
COMMD3Q9UBI1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD3Q9UBI1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD3Q9UBI1 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD3Q9UBI1 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD3Q9UBI1 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
COMMD3Q9UBI1 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
COMMD3Q9UBI1 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD3Q9UBI1 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD3Q9UBI1 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.41■□□□□ 0.22
COMMD3Q9UBI1 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD3Q9UBI1 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD3Q9UBI1 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD3Q9UBI1 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.41■□□□□ 0.22
COMMD3Q9UBI1 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD3Q9UBI1 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD3Q9UBI1 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
COMMD3Q9UBI1 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COMMD3Q9UBI1 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COMMD3Q9UBI1 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COMMD3Q9UBI1 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
COMMD3Q9UBI1 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
COMMD3Q9UBI1 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COMMD3Q9UBI1 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
COMMD3Q9UBI1 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
COMMD3Q9UBI1 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COMMD3Q9UBI1 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COMMD3Q9UBI1 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COMMD3Q9UBI1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.4■□□□□ 0.22
COMMD3Q9UBI1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COMMD3Q9UBI1 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.4■□□□□ 0.22
COMMD3Q9UBI1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.4■□□□□ 0.22
COMMD3Q9UBI1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.4■□□□□ 0.22
COMMD3Q9UBI1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.4■□□□□ 0.22
COMMD3Q9UBI1 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
COMMD3Q9UBI1 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
COMMD3Q9UBI1 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COMMD3Q9UBI1 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COMMD3Q9UBI1 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.4■□□□□ 0.22
COMMD3Q9UBI1 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COMMD3Q9UBI1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COMMD3Q9UBI1 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
COMMD3Q9UBI1 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
COMMD3Q9UBI1 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.4■□□□□ 0.22
COMMD3Q9UBI1 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.4■□□□□ 0.22
COMMD3Q9UBI1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COMMD3Q9UBI1 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
COMMD3Q9UBI1 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
COMMD3Q9UBI1 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
COMMD3Q9UBI1 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms