Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CUEDC1Q9NWM3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
CUEDC1Q9NWM3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
CUEDC1Q9NWM3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CUEDC1Q9NWM3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CUEDC1Q9NWM3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CUEDC1Q9NWM3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.01■□□□□ 0.47
CUEDC1Q9NWM3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CUEDC1Q9NWM3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CUEDC1Q9NWM3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CUEDC1Q9NWM3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.01■□□□□ 0.47
CUEDC1Q9NWM3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CUEDC1Q9NWM3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.01■□□□□ 0.47
CUEDC1Q9NWM3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.01■□□□□ 0.47
CUEDC1Q9NWM3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.01■□□□□ 0.47
CUEDC1Q9NWM3 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.01■□□□□ 0.47
CUEDC1Q9NWM3 MIR3180-5-201ENST00000583743 153 ntBASIC18.01■□□□□ 0.47
CUEDC1Q9NWM3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CUEDC1Q9NWM3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CUEDC1Q9NWM3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.01■□□□□ 0.47
CUEDC1Q9NWM3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CUEDC1Q9NWM3 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CUEDC1Q9NWM3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CUEDC1Q9NWM3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CUEDC1Q9NWM3 ANO7L1-203ENST00000602586 1720 ntBASIC18.01■□□□□ 0.47
CUEDC1Q9NWM3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CUEDC1Q9NWM3 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CUEDC1Q9NWM3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18■□□□□ 0.47
CUEDC1Q9NWM3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18■□□□□ 0.47
CUEDC1Q9NWM3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
CUEDC1Q9NWM3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CUEDC1Q9NWM3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
CUEDC1Q9NWM3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CUEDC1Q9NWM3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CUEDC1Q9NWM3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CUEDC1Q9NWM3 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
CUEDC1Q9NWM3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18■□□□□ 0.47
CUEDC1Q9NWM3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CUEDC1Q9NWM3 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CUEDC1Q9NWM3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18■□□□□ 0.47
CUEDC1Q9NWM3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18■□□□□ 0.47
CUEDC1Q9NWM3 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18■□□□□ 0.47
CUEDC1Q9NWM3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18■□□□□ 0.47
CUEDC1Q9NWM3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CUEDC1Q9NWM3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18■□□□□ 0.47
CUEDC1Q9NWM3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18■□□□□ 0.47
CUEDC1Q9NWM3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18■□□□□ 0.47
CUEDC1Q9NWM3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CUEDC1Q9NWM3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CUEDC1Q9NWM3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CUEDC1Q9NWM3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CUEDC1Q9NWM3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CUEDC1Q9NWM3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.99■□□□□ 0.47
CUEDC1Q9NWM3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CUEDC1Q9NWM3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
CUEDC1Q9NWM3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CUEDC1Q9NWM3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CUEDC1Q9NWM3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CUEDC1Q9NWM3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CUEDC1Q9NWM3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CUEDC1Q9NWM3 AL499627.1-201ENST00000569373 2188 ntBASIC17.99■□□□□ 0.47
CUEDC1Q9NWM3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.99■□□□□ 0.47
CUEDC1Q9NWM3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CUEDC1Q9NWM3 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.99■□□□□ 0.47
CUEDC1Q9NWM3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.99■□□□□ 0.47
CUEDC1Q9NWM3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.99■□□□□ 0.47
CUEDC1Q9NWM3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.99■□□□□ 0.47
CUEDC1Q9NWM3 AC010203.1-204ENST00000548782 407 ntBASIC17.99■□□□□ 0.47
CUEDC1Q9NWM3 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CUEDC1Q9NWM3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CUEDC1Q9NWM3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.99■□□□□ 0.47
CUEDC1Q9NWM3 AC091076.1-201ENST00000610741 619 ntBASIC17.99■□□□□ 0.47
CUEDC1Q9NWM3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CUEDC1Q9NWM3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CUEDC1Q9NWM3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CUEDC1Q9NWM3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CUEDC1Q9NWM3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
CUEDC1Q9NWM3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CUEDC1Q9NWM3 Z98044.1-201ENST00000632503 1764 ntBASIC17.99■□□□□ 0.47
CUEDC1Q9NWM3 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CUEDC1Q9NWM3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CUEDC1Q9NWM3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CUEDC1Q9NWM3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
CUEDC1Q9NWM3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
CUEDC1Q9NWM3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CUEDC1Q9NWM3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CUEDC1Q9NWM3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CUEDC1Q9NWM3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CUEDC1Q9NWM3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.98■□□□□ 0.47
CUEDC1Q9NWM3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CUEDC1Q9NWM3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.98■□□□□ 0.47
CUEDC1Q9NWM3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CUEDC1Q9NWM3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.98■□□□□ 0.47
CUEDC1Q9NWM3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.98■□□□□ 0.47
CUEDC1Q9NWM3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.98■□□□□ 0.47
CUEDC1Q9NWM3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.98■□□□□ 0.47
CUEDC1Q9NWM3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CUEDC1Q9NWM3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CUEDC1Q9NWM3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.98■□□□□ 0.47
CUEDC1Q9NWM3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms