Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RNF216Q9NWF9 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RNF216Q9NWF9 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF216Q9NWF9 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RNF216Q9NWF9 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RNF216Q9NWF9 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RNF216Q9NWF9 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.47■■□□□ 1.03
RNF216Q9NWF9 ZNF626-201ENST00000291750 1123 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RNF216Q9NWF9 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF216Q9NWF9 SNORA72.3-201ENST00000365074 132 ntBASIC21.47■■□□□ 1.03
RNF216Q9NWF9 TMEM138-202ENST00000381787 1205 ntTSL 2 BASIC21.47■■□□□ 1.03
RNF216Q9NWF9 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RNF216Q9NWF9 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RNF216Q9NWF9 LYRM7-203ENST00000510516 604 ntTSL 2 BASIC21.47■■□□□ 1.03
RNF216Q9NWF9 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RNF216Q9NWF9 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.47■■□□□ 1.03
RNF216Q9NWF9 AC135279.1-201ENST00000543493 504 ntBASIC21.47■■□□□ 1.03
RNF216Q9NWF9 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RNF216Q9NWF9 AL445675.2-201ENST00000620291 557 ntBASIC21.47■■□□□ 1.03
RNF216Q9NWF9 AL590326.2-201ENST00000625139 305 ntBASIC21.47■■□□□ 1.03
RNF216Q9NWF9 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RNF216Q9NWF9 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC21.47■■□□□ 1.03
RNF216Q9NWF9 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF216Q9NWF9 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.47■■□□□ 1.03
RNF216Q9NWF9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.47■■□□□ 1.03
RNF216Q9NWF9 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF216Q9NWF9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RNF216Q9NWF9 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.47■■□□□ 1.03
RNF216Q9NWF9 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF216Q9NWF9 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF216Q9NWF9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.47■■□□□ 1.03
RNF216Q9NWF9 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF216Q9NWF9 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RNF216Q9NWF9 AC011270.2-201ENST00000624293 2550 ntBASIC21.46■■□□□ 1.03
RNF216Q9NWF9 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF216Q9NWF9 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.46■■□□□ 1.03
RNF216Q9NWF9 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF216Q9NWF9 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
RNF216Q9NWF9 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF216Q9NWF9 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF216Q9NWF9 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC21.46■■□□□ 1.03
RNF216Q9NWF9 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC21.46■■□□□ 1.03
RNF216Q9NWF9 AL157702.2-201ENST00000428292 1223 ntTSL 3 BASIC21.46■■□□□ 1.03
RNF216Q9NWF9 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.46■■□□□ 1.03
RNF216Q9NWF9 AC112191.1-201ENST00000523689 701 ntBASIC21.46■■□□□ 1.03
RNF216Q9NWF9 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.46■■□□□ 1.03
RNF216Q9NWF9 DGCR10-201ENST00000609839 495 ntBASIC21.46■■□□□ 1.03
RNF216Q9NWF9 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.46■■□□□ 1.03
RNF216Q9NWF9 AC068137.4-201ENST00000638485 296 ntBASIC21.46■■□□□ 1.03
RNF216Q9NWF9 AC006927.2-201ENST00000639256 389 ntBASIC21.46■■□□□ 1.03
RNF216Q9NWF9 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
RNF216Q9NWF9 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RNF216Q9NWF9 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF216Q9NWF9 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF216Q9NWF9 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF216Q9NWF9 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF216Q9NWF9 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.46■■□□□ 1.03
RNF216Q9NWF9 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
RNF216Q9NWF9 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.45■■□□□ 1.03
RNF216Q9NWF9 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.45■■□□□ 1.02
RNF216Q9NWF9 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF216Q9NWF9 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
RNF216Q9NWF9 AC116351.2-201ENST00000606540 1585 ntBASIC21.45■■□□□ 1.02
RNF216Q9NWF9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.45■■□□□ 1.02
RNF216Q9NWF9 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RNF216Q9NWF9 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF216Q9NWF9 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC21.45■■□□□ 1.02
RNF216Q9NWF9 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF216Q9NWF9 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF216Q9NWF9 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RNF216Q9NWF9 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.45■■□□□ 1.02
RNF216Q9NWF9 AC010460.2-201ENST00000509054 677 ntBASIC21.45■■□□□ 1.02
RNF216Q9NWF9 OR4A46P-201ENST00000527255 933 ntBASIC21.45■■□□□ 1.02
RNF216Q9NWF9 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.45■■□□□ 1.02
RNF216Q9NWF9 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RNF216Q9NWF9 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RNF216Q9NWF9 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.45■■□□□ 1.02
RNF216Q9NWF9 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF216Q9NWF9 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF216Q9NWF9 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF216Q9NWF9 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.45■■□□□ 1.02
RNF216Q9NWF9 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF216Q9NWF9 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF216Q9NWF9 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.45■■□□□ 1.02
RNF216Q9NWF9 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF216Q9NWF9 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF216Q9NWF9 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RNF216Q9NWF9 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
RNF216Q9NWF9 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF216Q9NWF9 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF216Q9NWF9 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.44■■□□□ 1.02
RNF216Q9NWF9 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.44■■□□□ 1.02
RNF216Q9NWF9 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.44■■□□□ 1.02
RNF216Q9NWF9 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF216Q9NWF9 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.44■■□□□ 1.02
RNF216Q9NWF9 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF216Q9NWF9 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF216Q9NWF9 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.44■■□□□ 1.02
RNF216Q9NWF9 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RNF216Q9NWF9 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms