Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPTLC3Q9NUV7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SPTLC3Q9NUV7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SPTLC3Q9NUV7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SPTLC3Q9NUV7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.54■□□□□ 0.88
SPTLC3Q9NUV7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPTLC3Q9NUV7 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPTLC3Q9NUV7 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SPTLC3Q9NUV7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SPTLC3Q9NUV7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.53■□□□□ 0.88
SPTLC3Q9NUV7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
SPTLC3Q9NUV7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
SPTLC3Q9NUV7 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SPTLC3Q9NUV7 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.53■□□□□ 0.88
SPTLC3Q9NUV7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
SPTLC3Q9NUV7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPTLC3Q9NUV7 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.53■□□□□ 0.88
SPTLC3Q9NUV7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.53■□□□□ 0.88
SPTLC3Q9NUV7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.53■□□□□ 0.88
SPTLC3Q9NUV7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.53■□□□□ 0.88
SPTLC3Q9NUV7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.53■□□□□ 0.88
SPTLC3Q9NUV7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.53■□□□□ 0.88
SPTLC3Q9NUV7 PNMA6B-201ENST00000538162 1200 ntBASIC20.53■□□□□ 0.88
SPTLC3Q9NUV7 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.53■□□□□ 0.88
SPTLC3Q9NUV7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.53■□□□□ 0.88
SPTLC3Q9NUV7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPTLC3Q9NUV7 MYC-209ENST00000641252 345 ntBASIC20.53■□□□□ 0.88
SPTLC3Q9NUV7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPTLC3Q9NUV7 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SPTLC3Q9NUV7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
SPTLC3Q9NUV7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SPTLC3Q9NUV7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.53■□□□□ 0.88
SPTLC3Q9NUV7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
SPTLC3Q9NUV7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SPTLC3Q9NUV7 NKILA-202ENST00000614771 2598 ntBASIC20.52■□□□□ 0.88
SPTLC3Q9NUV7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPTLC3Q9NUV7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SPTLC3Q9NUV7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.52■□□□□ 0.88
SPTLC3Q9NUV7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SPTLC3Q9NUV7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
SPTLC3Q9NUV7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPTLC3Q9NUV7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SPTLC3Q9NUV7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.52■□□□□ 0.88
SPTLC3Q9NUV7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.52■□□□□ 0.88
SPTLC3Q9NUV7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.52■□□□□ 0.88
SPTLC3Q9NUV7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.52■□□□□ 0.88
SPTLC3Q9NUV7 AC098934.4-201ENST00000564127 592 ntBASIC20.52■□□□□ 0.88
SPTLC3Q9NUV7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SPTLC3Q9NUV7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.52■□□□□ 0.88
SPTLC3Q9NUV7 HLA-B-256ENST00000639848 1089 ntBASIC20.52■□□□□ 0.88
SPTLC3Q9NUV7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPTLC3Q9NUV7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPTLC3Q9NUV7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SPTLC3Q9NUV7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SPTLC3Q9NUV7 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.52■□□□□ 0.87
SPTLC3Q9NUV7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SPTLC3Q9NUV7 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
SPTLC3Q9NUV7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SPTLC3Q9NUV7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPTLC3Q9NUV7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SPTLC3Q9NUV7 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SPTLC3Q9NUV7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPTLC3Q9NUV7 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SPTLC3Q9NUV7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SPTLC3Q9NUV7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.51■□□□□ 0.87
SPTLC3Q9NUV7 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SPTLC3Q9NUV7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.51■□□□□ 0.87
SPTLC3Q9NUV7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPTLC3Q9NUV7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SPTLC3Q9NUV7 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SPTLC3Q9NUV7 SLC29A4P1-201ENST00000398760 971 ntBASIC20.51■□□□□ 0.87
SPTLC3Q9NUV7 TSPY6P-201ENST00000448518 926 ntBASIC20.51■□□□□ 0.87
SPTLC3Q9NUV7 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.51■□□□□ 0.87
SPTLC3Q9NUV7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.51■□□□□ 0.87
SPTLC3Q9NUV7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.51■□□□□ 0.87
SPTLC3Q9NUV7 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.51■□□□□ 0.87
SPTLC3Q9NUV7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC20.51■□□□□ 0.87
SPTLC3Q9NUV7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPTLC3Q9NUV7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.51■□□□□ 0.87
SPTLC3Q9NUV7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPTLC3Q9NUV7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPTLC3Q9NUV7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPTLC3Q9NUV7 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SPTLC3Q9NUV7 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPTLC3Q9NUV7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SPTLC3Q9NUV7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPTLC3Q9NUV7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
SPTLC3Q9NUV7 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC20.5■□□□□ 0.87
SPTLC3Q9NUV7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPTLC3Q9NUV7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SPTLC3Q9NUV7 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPTLC3Q9NUV7 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SPTLC3Q9NUV7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPTLC3Q9NUV7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPTLC3Q9NUV7 TUBB8P6-201ENST00000436895 1288 ntBASIC20.5■□□□□ 0.87
SPTLC3Q9NUV7 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.5■□□□□ 0.87
SPTLC3Q9NUV7 AC097658.1-201ENST00000475555 843 ntBASIC20.5■□□□□ 0.87
SPTLC3Q9NUV7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SPTLC3Q9NUV7 AC120498.8-201ENST00000614275 531 ntBASIC20.5■□□□□ 0.87
SPTLC3Q9NUV7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms