Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BLOC1S4Q9NUP1 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
BLOC1S4Q9NUP1 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.73■□□□□ 0.91
BLOC1S4Q9NUP1 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
BLOC1S4Q9NUP1 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BLOC1S4Q9NUP1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
BLOC1S4Q9NUP1 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
BLOC1S4Q9NUP1 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
BLOC1S4Q9NUP1 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.72■□□□□ 0.91
BLOC1S4Q9NUP1 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
BLOC1S4Q9NUP1 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
BLOC1S4Q9NUP1 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.72■□□□□ 0.91
BLOC1S4Q9NUP1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BLOC1S4Q9NUP1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.72■□□□□ 0.91
BLOC1S4Q9NUP1 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.72■□□□□ 0.91
BLOC1S4Q9NUP1 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BLOC1S4Q9NUP1 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BLOC1S4Q9NUP1 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
BLOC1S4Q9NUP1 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
BLOC1S4Q9NUP1 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BLOC1S4Q9NUP1 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BLOC1S4Q9NUP1 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.72■□□□□ 0.91
BLOC1S4Q9NUP1 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.72■□□□□ 0.91
BLOC1S4Q9NUP1 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.72■□□□□ 0.91
BLOC1S4Q9NUP1 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.72■□□□□ 0.91
BLOC1S4Q9NUP1 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
BLOC1S4Q9NUP1 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BLOC1S4Q9NUP1 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
BLOC1S4Q9NUP1 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BLOC1S4Q9NUP1 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
BLOC1S4Q9NUP1 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.72■□□□□ 0.91
BLOC1S4Q9NUP1 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
BLOC1S4Q9NUP1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.72■□□□□ 0.91
BLOC1S4Q9NUP1 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
BLOC1S4Q9NUP1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.72■□□□□ 0.91
BLOC1S4Q9NUP1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BLOC1S4Q9NUP1 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BLOC1S4Q9NUP1 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.71■□□□□ 0.91
BLOC1S4Q9NUP1 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BLOC1S4Q9NUP1 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
BLOC1S4Q9NUP1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BLOC1S4Q9NUP1 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.71■□□□□ 0.91
BLOC1S4Q9NUP1 AP000593.1-201ENST00000393668 712 ntBASIC20.71■□□□□ 0.91
BLOC1S4Q9NUP1 KRT18P23-201ENST00000435622 1283 ntBASIC20.71■□□□□ 0.91
BLOC1S4Q9NUP1 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.71■□□□□ 0.91
BLOC1S4Q9NUP1 AC009947.2-201ENST00000444014 672 ntBASIC20.71■□□□□ 0.91
BLOC1S4Q9NUP1 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.71■□□□□ 0.91
BLOC1S4Q9NUP1 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.71■□□□□ 0.91
BLOC1S4Q9NUP1 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BLOC1S4Q9NUP1 AL138966.2-201ENST00000621997 464 ntBASIC20.71■□□□□ 0.91
BLOC1S4Q9NUP1 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
BLOC1S4Q9NUP1 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.71■□□□□ 0.91
BLOC1S4Q9NUP1 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BLOC1S4Q9NUP1 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
BLOC1S4Q9NUP1 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.71■□□□□ 0.91
BLOC1S4Q9NUP1 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BLOC1S4Q9NUP1 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.71■□□□□ 0.91
BLOC1S4Q9NUP1 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.71■□□□□ 0.91
BLOC1S4Q9NUP1 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BLOC1S4Q9NUP1 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.71■□□□□ 0.91
BLOC1S4Q9NUP1 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.71■□□□□ 0.91
BLOC1S4Q9NUP1 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BLOC1S4Q9NUP1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BLOC1S4Q9NUP1 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
BLOC1S4Q9NUP1 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.7■□□□□ 0.9
BLOC1S4Q9NUP1 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.7■□□□□ 0.9
BLOC1S4Q9NUP1 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BLOC1S4Q9NUP1 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BLOC1S4Q9NUP1 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BLOC1S4Q9NUP1 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
BLOC1S4Q9NUP1 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BLOC1S4Q9NUP1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.7■□□□□ 0.9
BLOC1S4Q9NUP1 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BLOC1S4Q9NUP1 SLC25A3P1-201ENST00000443844 931 ntBASIC20.7■□□□□ 0.9
BLOC1S4Q9NUP1 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BLOC1S4Q9NUP1 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
BLOC1S4Q9NUP1 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
BLOC1S4Q9NUP1 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BLOC1S4Q9NUP1 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
BLOC1S4Q9NUP1 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.7■□□□□ 0.9
BLOC1S4Q9NUP1 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
BLOC1S4Q9NUP1 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.7■□□□□ 0.9
BLOC1S4Q9NUP1 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
BLOC1S4Q9NUP1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
BLOC1S4Q9NUP1 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BLOC1S4Q9NUP1 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.7■□□□□ 0.9
BLOC1S4Q9NUP1 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
BLOC1S4Q9NUP1 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.7■□□□□ 0.9
BLOC1S4Q9NUP1 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
BLOC1S4Q9NUP1 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BLOC1S4Q9NUP1 AC099343.3-201ENST00000605834 2503 ntBASIC20.69■□□□□ 0.9
BLOC1S4Q9NUP1 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BLOC1S4Q9NUP1 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BLOC1S4Q9NUP1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.69■□□□□ 0.9
BLOC1S4Q9NUP1 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
BLOC1S4Q9NUP1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BLOC1S4Q9NUP1 BICD1-207ENST00000551848 1962 ntBASIC20.69■□□□□ 0.9
BLOC1S4Q9NUP1 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BLOC1S4Q9NUP1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BLOC1S4Q9NUP1 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms