Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRC40Q9H9A6 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRC40Q9H9A6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRC40Q9H9A6 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRRC40Q9H9A6 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRRC40Q9H9A6 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.95■□□□□ 0.62
LRRC40Q9H9A6 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRRC40Q9H9A6 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
LRRC40Q9H9A6 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.94■□□□□ 0.62
LRRC40Q9H9A6 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRC40Q9H9A6 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.94■□□□□ 0.62
LRRC40Q9H9A6 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRC40Q9H9A6 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.94■□□□□ 0.62
LRRC40Q9H9A6 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRC40Q9H9A6 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRC40Q9H9A6 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRC40Q9H9A6 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRC40Q9H9A6 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRC40Q9H9A6 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRC40Q9H9A6 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LRRC40Q9H9A6 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LRRC40Q9H9A6 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.94■□□□□ 0.62
LRRC40Q9H9A6 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRC40Q9H9A6 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRC40Q9H9A6 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
LRRC40Q9H9A6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.94■□□□□ 0.62
LRRC40Q9H9A6 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LRRC40Q9H9A6 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LRRC40Q9H9A6 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.94■□□□□ 0.62
LRRC40Q9H9A6 AP006294.2-201ENST00000641667 209 ntBASIC18.94■□□□□ 0.62
LRRC40Q9H9A6 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.94■□□□□ 0.62
LRRC40Q9H9A6 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.94■□□□□ 0.62
LRRC40Q9H9A6 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LRRC40Q9H9A6 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.94■□□□□ 0.62
LRRC40Q9H9A6 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
LRRC40Q9H9A6 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRC40Q9H9A6 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
LRRC40Q9H9A6 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRC40Q9H9A6 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LRRC40Q9H9A6 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
LRRC40Q9H9A6 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC40Q9H9A6 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.93■□□□□ 0.62
LRRC40Q9H9A6 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC40Q9H9A6 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.93■□□□□ 0.62
LRRC40Q9H9A6 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC40Q9H9A6 AC008556.1-201ENST00000610908 2040 ntBASIC18.93■□□□□ 0.62
LRRC40Q9H9A6 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC40Q9H9A6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.93■□□□□ 0.62
LRRC40Q9H9A6 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC40Q9H9A6 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
LRRC40Q9H9A6 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC40Q9H9A6 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC40Q9H9A6 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC40Q9H9A6 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC40Q9H9A6 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC40Q9H9A6 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
LRRC40Q9H9A6 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC40Q9H9A6 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC40Q9H9A6 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC40Q9H9A6 AL023284.2-201ENST00000405850 579 ntBASIC18.93■□□□□ 0.62
LRRC40Q9H9A6 MCCD1P1-208ENST00000445732 328 ntBASIC18.93■□□□□ 0.62
LRRC40Q9H9A6 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.93■□□□□ 0.62
LRRC40Q9H9A6 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.93■□□□□ 0.62
LRRC40Q9H9A6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.93■□□□□ 0.62
LRRC40Q9H9A6 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.93■□□□□ 0.62
LRRC40Q9H9A6 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.93■□□□□ 0.62
LRRC40Q9H9A6 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.93■□□□□ 0.62
LRRC40Q9H9A6 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
LRRC40Q9H9A6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC40Q9H9A6 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC40Q9H9A6 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.93■□□□□ 0.62
LRRC40Q9H9A6 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC40Q9H9A6 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC40Q9H9A6 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC40Q9H9A6 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC40Q9H9A6 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC40Q9H9A6 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.92■□□□□ 0.62
LRRC40Q9H9A6 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.92■□□□□ 0.62
LRRC40Q9H9A6 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC40Q9H9A6 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.92■□□□□ 0.62
LRRC40Q9H9A6 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.92■□□□□ 0.62
LRRC40Q9H9A6 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC40Q9H9A6 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC40Q9H9A6 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC40Q9H9A6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
LRRC40Q9H9A6 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC40Q9H9A6 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC40Q9H9A6 UNC93B2-201ENST00000285383 730 ntBASIC18.92■□□□□ 0.62
LRRC40Q9H9A6 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.92■□□□□ 0.62
LRRC40Q9H9A6 TSPY7P-201ENST00000431358 1114 ntBASIC18.92■□□□□ 0.62
LRRC40Q9H9A6 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC40Q9H9A6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC40Q9H9A6 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
LRRC40Q9H9A6 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.92■□□□□ 0.62
LRRC40Q9H9A6 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.92■□□□□ 0.62
LRRC40Q9H9A6 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.92■□□□□ 0.62
LRRC40Q9H9A6 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.92■□□□□ 0.62
LRRC40Q9H9A6 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
LRRC40Q9H9A6 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.92■□□□□ 0.62
LRRC40Q9H9A6 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms