Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 HEIH-201ENST00000623091 1652 ntBASIC18.7■□□□□ 0.58
CCDC68Q9H2F9 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC68Q9H2F9 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC68Q9H2F9 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC68Q9H2F9 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC68Q9H2F9 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.7■□□□□ 0.58
CCDC68Q9H2F9 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC68Q9H2F9 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC68Q9H2F9 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC68Q9H2F9 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC68Q9H2F9 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC68Q9H2F9 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC68Q9H2F9 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC68Q9H2F9 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC68Q9H2F9 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CCDC68Q9H2F9 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC68Q9H2F9 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC68Q9H2F9 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC68Q9H2F9 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC68Q9H2F9 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC68Q9H2F9 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC68Q9H2F9 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CCDC68Q9H2F9 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC68Q9H2F9 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
CCDC68Q9H2F9 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CCDC68Q9H2F9 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC68Q9H2F9 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC68Q9H2F9 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC68Q9H2F9 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC68Q9H2F9 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CCDC68Q9H2F9 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC68Q9H2F9 WIZP1-201ENST00000531444 2299 ntBASIC18.69■□□□□ 0.58
CCDC68Q9H2F9 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CCDC68Q9H2F9 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC68Q9H2F9 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC68Q9H2F9 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC68Q9H2F9 AC008040.2-201ENST00000461049 708 ntBASIC18.69■□□□□ 0.58
CCDC68Q9H2F9 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC68Q9H2F9 NUDT16P1-203ENST00000513809 620 ntBASIC18.69■□□□□ 0.58
CCDC68Q9H2F9 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.69■□□□□ 0.58
CCDC68Q9H2F9 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.69■□□□□ 0.58
CCDC68Q9H2F9 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CCDC68Q9H2F9 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC68Q9H2F9 AC233702.5-201ENST00000584107 538 ntBASIC18.69■□□□□ 0.58
CCDC68Q9H2F9 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.69■□□□□ 0.58
CCDC68Q9H2F9 AP000692.2-201ENST00000608391 879 ntBASIC18.69■□□□□ 0.58
CCDC68Q9H2F9 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CCDC68Q9H2F9 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CCDC68Q9H2F9 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC68Q9H2F9 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC68Q9H2F9 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC68Q9H2F9 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC68Q9H2F9 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC68Q9H2F9 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC68Q9H2F9 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC68Q9H2F9 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC68Q9H2F9 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC68Q9H2F9 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC68Q9H2F9 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC68Q9H2F9 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC68Q9H2F9 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC68Q9H2F9 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CCDC68Q9H2F9 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC68Q9H2F9 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.68■□□□□ 0.58
CCDC68Q9H2F9 AL355355.2-201ENST00000442321 338 ntBASIC18.68■□□□□ 0.58
CCDC68Q9H2F9 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.68■□□□□ 0.58
CCDC68Q9H2F9 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.68■□□□□ 0.58
CCDC68Q9H2F9 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC68Q9H2F9 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
CCDC68Q9H2F9 DGCR10-201ENST00000609839 495 ntBASIC18.68■□□□□ 0.58
CCDC68Q9H2F9 AL049637.2-201ENST00000641778 930 ntBASIC18.68■□□□□ 0.58
CCDC68Q9H2F9 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC68Q9H2F9 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC68Q9H2F9 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CCDC68Q9H2F9 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CCDC68Q9H2F9 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
CCDC68Q9H2F9 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC68Q9H2F9 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC68Q9H2F9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC68Q9H2F9 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC68Q9H2F9 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
CCDC68Q9H2F9 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CCDC68Q9H2F9 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CCDC68Q9H2F9 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC68Q9H2F9 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CCDC68Q9H2F9 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC68Q9H2F9 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC68Q9H2F9 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CCDC68Q9H2F9 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC68Q9H2F9 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC68Q9H2F9 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC68Q9H2F9 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC68Q9H2F9 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC68Q9H2F9 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC68Q9H2F9 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC68Q9H2F9 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC68Q9H2F9 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
CCDC68Q9H2F9 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC68Q9H2F9 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC68Q9H2F9 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms