Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX47Q9H0S4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX47Q9H0S4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DDX47Q9H0S4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.45■□□□□ 0.7
DDX47Q9H0S4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DDX47Q9H0S4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DDX47Q9H0S4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DDX47Q9H0S4 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
DDX47Q9H0S4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DDX47Q9H0S4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX47Q9H0S4 AC093677.2-201ENST00000600169 1863 ntBASIC19.44■□□□□ 0.7
DDX47Q9H0S4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.44■□□□□ 0.7
DDX47Q9H0S4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DDX47Q9H0S4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.44■□□□□ 0.7
DDX47Q9H0S4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
DDX47Q9H0S4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.44■□□□□ 0.7
DDX47Q9H0S4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX47Q9H0S4 POU5F1P3-201ENST00000428824 1078 ntBASIC19.44■□□□□ 0.7
DDX47Q9H0S4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX47Q9H0S4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.44■□□□□ 0.7
DDX47Q9H0S4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
DDX47Q9H0S4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.44■□□□□ 0.7
DDX47Q9H0S4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.44■□□□□ 0.7
DDX47Q9H0S4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX47Q9H0S4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX47Q9H0S4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DDX47Q9H0S4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX47Q9H0S4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
DDX47Q9H0S4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.44■□□□□ 0.7
DDX47Q9H0S4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.44■□□□□ 0.7
DDX47Q9H0S4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
DDX47Q9H0S4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
DDX47Q9H0S4 AL357033.4-201ENST00000617703 1807 ntBASIC19.44■□□□□ 0.7
DDX47Q9H0S4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.44■□□□□ 0.7
DDX47Q9H0S4 LINC00896-202ENST00000609602 2128 ntBASIC19.43■□□□□ 0.7
DDX47Q9H0S4 KRT8P11-201ENST00000409686 1436 ntBASIC19.43■□□□□ 0.7
DDX47Q9H0S4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.43■□□□□ 0.7
DDX47Q9H0S4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.43■□□□□ 0.7
DDX47Q9H0S4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX47Q9H0S4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX47Q9H0S4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
DDX47Q9H0S4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX47Q9H0S4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX47Q9H0S4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
DDX47Q9H0S4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
DDX47Q9H0S4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DDX47Q9H0S4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.43■□□□□ 0.7
DDX47Q9H0S4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.43■□□□□ 0.7
DDX47Q9H0S4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.43■□□□□ 0.7
DDX47Q9H0S4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
DDX47Q9H0S4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.43■□□□□ 0.7
DDX47Q9H0S4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.43■□□□□ 0.7
DDX47Q9H0S4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
DDX47Q9H0S4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.43■□□□□ 0.7
DDX47Q9H0S4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DDX47Q9H0S4 HCG11-201ENST00000411553 5696 ntBASIC19.43■□□□□ 0.7
DDX47Q9H0S4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
DDX47Q9H0S4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
DDX47Q9H0S4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.43■□□□□ 0.7
DDX47Q9H0S4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX47Q9H0S4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.43■□□□□ 0.7
DDX47Q9H0S4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.43■□□□□ 0.7
DDX47Q9H0S4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX47Q9H0S4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX47Q9H0S4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.43■□□□□ 0.7
DDX47Q9H0S4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
DDX47Q9H0S4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DDX47Q9H0S4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.42■□□□□ 0.7
DDX47Q9H0S4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX47Q9H0S4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
DDX47Q9H0S4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX47Q9H0S4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DDX47Q9H0S4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX47Q9H0S4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DDX47Q9H0S4 HTR7P1-202ENST00000624664 4411 ntBASIC19.42■□□□□ 0.7
DDX47Q9H0S4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX47Q9H0S4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX47Q9H0S4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX47Q9H0S4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.42■□□□□ 0.7
DDX47Q9H0S4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.42■□□□□ 0.7
DDX47Q9H0S4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
DDX47Q9H0S4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.42■□□□□ 0.7
DDX47Q9H0S4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
DDX47Q9H0S4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DDX47Q9H0S4 AC004264.1-201ENST00000608354 794 ntBASIC19.42■□□□□ 0.7
DDX47Q9H0S4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DDX47Q9H0S4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
DDX47Q9H0S4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
DDX47Q9H0S4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DDX47Q9H0S4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.42■□□□□ 0.7
DDX47Q9H0S4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX47Q9H0S4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX47Q9H0S4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
DDX47Q9H0S4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.42■□□□□ 0.7
DDX47Q9H0S4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX47Q9H0S4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DDX47Q9H0S4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.41■□□□□ 0.7
DDX47Q9H0S4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
DDX47Q9H0S4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX47Q9H0S4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms