Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 UPF1-202ENST00000594243 683 ntTSL 317.48■□□□□ 0.391e-5■■■□□ 18
XRN2Q9H0D6 LINC01529-201ENST00000433059 2167 ntTSL 217.44■□□□□ 0.385e-8■■■□□ 18
XRN2Q9H0D6 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.381e-5■■■□□ 18
XRN2Q9H0D6 HDAC4-204ENST00000446876 554 ntTSL 417.39■□□□□ 0.371e-5■■■□□ 18
XRN2Q9H0D6 AL157392.3-223ENST00000621308 793 ntTSL 517.34■□□□□ 0.371e-5■■■□□ 18
XRN2Q9H0D6 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.361e-5■■■□□ 18
XRN2Q9H0D6 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.3■□□□□ 0.361e-5■■■□□ 18
XRN2Q9H0D6 DPH7-204ENST00000467768 750 ntTSL 517.3■□□□□ 0.361e-5■■■□□ 18
XRN2Q9H0D6 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.28■□□□□ 0.361e-5■■■□□ 18
XRN2Q9H0D6 TEPSIN-204ENST00000571115 551 ntTSL 317.27■□□□□ 0.361e-5■■■□□ 18
XRN2Q9H0D6 DMKN-259ENST00000498211 666 ntTSL 1 (best)17.25■□□□□ 0.351e-5■■■□□ 18
XRN2Q9H0D6 DMKN-224ENST00000464709 822 ntTSL 1 (best)17.25■□□□□ 0.351e-5■■■□□ 18
XRN2Q9H0D6 ACADM-215ENST00000532509 825 ntTSL 517.24■□□□□ 0.351e-5■■■□□ 18
XRN2Q9H0D6 LZTR1-213ENST00000491432 527 ntTSL 317.24■□□□□ 0.355e-8■■■□□ 18
XRN2Q9H0D6 ACADM-204ENST00000473018 579 ntTSL 217.24■□□□□ 0.351e-5■■■□□ 18
XRN2Q9H0D6 DMKN-249ENST00000486450 583 ntTSL 317.23■□□□□ 0.351e-5■■■□□ 18
XRN2Q9H0D6 AL157392.3-230ENST00000594575 908 ntTSL 517.22■□□□□ 0.351e-5■■■□□ 18
XRN2Q9H0D6 SLC23A3-205ENST00000421779 537 ntTSL 417.22■□□□□ 0.351e-5■■■□□ 18
XRN2Q9H0D6 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.341e-5■■■□□ 18
XRN2Q9H0D6 TEPSIN-207ENST00000573295 2552 ntTSL 217.2■□□□□ 0.341e-5■■■□□ 18
XRN2Q9H0D6 TRMT61A-201ENST00000299202 2827 ntTSL 1 (best)17.18■□□□□ 0.345e-8■■■□□ 18
XRN2Q9H0D6 ZNF202-203ENST00000526252 564 ntTSL 417.16■□□□□ 0.341e-5■■■□□ 18
XRN2Q9H0D6 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.331e-5■■■□□ 18
XRN2Q9H0D6 NADK-214ENST00000497186 683 ntTSL 317.12■□□□□ 0.332e-10■■■□□ 18
XRN2Q9H0D6 NADK-207ENST00000469045 890 ntTSL 517.12■□□□□ 0.332e-10■■■□□ 18
XRN2Q9H0D6 SH3TC1-212ENST00000507801 538 ntTSL 417.11■□□□□ 0.335e-8■■■□□ 18
XRN2Q9H0D6 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.07■□□□□ 0.325e-8■■■□□ 18
XRN2Q9H0D6 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.06■□□□□ 0.325e-8■■■□□ 18
XRN2Q9H0D6 DPH7-209ENST00000477690 1220 ntTSL 317■□□□□ 0.311e-5■■■□□ 18
XRN2Q9H0D6 ARAP1-217ENST00000542612 428 ntTSL 516.99■□□□□ 0.311e-5■■■□□ 18
XRN2Q9H0D6 NKIRAS2-211ENST00000491638 1041 ntTSL 216.96■□□□□ 0.311e-5■■■□□ 18
XRN2Q9H0D6 ACADM-216ENST00000534146 654 ntTSL 416.93■□□□□ 0.31e-5■■■□□ 18
XRN2Q9H0D6 WDR45B-205ENST00000572583 2322 ntTSL 1 (best)16.93■□□□□ 0.31e-5■■■□□ 18
XRN2Q9H0D6 COQ8A-207ENST00000485462 2141 ntTSL 1 (best)16.92■□□□□ 0.33e-27■■■□□ 18
XRN2Q9H0D6 ACADM-213ENST00000530953 508 ntTSL 516.9■□□□□ 0.31e-5■■■□□ 18
XRN2Q9H0D6 RPL18A-202ENST00000597648 683 ntTSL 316.88■□□□□ 0.295e-8■■■□□ 18
XRN2Q9H0D6 MAPK8-208ENST00000426557 860 ntTSL 416.81■□□□□ 0.281e-5■■■□□ 18
XRN2Q9H0D6 WDR1-214ENST00000509695 467 ntTSL 416.78■□□□□ 0.281e-5■■■□□ 18
XRN2Q9H0D6 STXBP2-217ENST00000599737 1523 ntTSL 516.75■□□□□ 0.271e-7■■■□□ 18
XRN2Q9H0D6 TECR-225ENST00000601652 551 ntTSL 416.75■□□□□ 0.271e-5■■■□□ 18
XRN2Q9H0D6 LYPLA2-206ENST00000420982 614 ntTSL 316.71■□□□□ 0.271e-5■■■□□ 18
XRN2Q9H0D6 UNKL-213ENST00000513783 582 ntTSL 416.69■□□□□ 0.261e-6■■■□□ 18
XRN2Q9H0D6 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.67■□□□□ 0.261e-5■■■□□ 18
XRN2Q9H0D6 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.61■□□□□ 0.251e-5■■■□□ 18
XRN2Q9H0D6 SERINC2-204ENST00000491976 2807 ntTSL 216.6■□□□□ 0.251e-5■■■□□ 18
XRN2Q9H0D6 SREK1-209ENST00000520953 2172 ntTSL 516.58■□□□□ 0.241e-5■■■□□ 18
XRN2Q9H0D6 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.241e-5■■■□□ 18
XRN2Q9H0D6 TLN1-204ENST00000465002 543 ntTSL 416.52■□□□□ 0.245e-8■■■□□ 18
XRN2Q9H0D6 DDX41-210ENST00000509576 819 ntTSL 316.47■□□□□ 0.231e-5■■■□□ 18
XRN2Q9H0D6 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC16.47■□□□□ 0.231e-5■■■□□ 18
XRN2Q9H0D6 DDX41-206ENST00000506965 560 ntTSL 516.47■□□□□ 0.231e-5■■■□□ 18
XRN2Q9H0D6 NADK-211ENST00000489538 475 ntTSL 316.45■□□□□ 0.222e-10■■■□□ 18
XRN2Q9H0D6 AL157392.3-229ENST00000613191 1241 ntTSL 516.44■□□□□ 0.221e-5■■■□□ 18
XRN2Q9H0D6 AL157392.3-231ENST00000621532 828 ntTSL 516.44■□□□□ 0.221e-5■■■□□ 18
XRN2Q9H0D6 WDR73-213ENST00000559994 2063 ntTSL 516.4■□□□□ 0.221e-5■■■□□ 18
XRN2Q9H0D6 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.211e-5■■■□□ 18
XRN2Q9H0D6 IPO4-216ENST00000561034 535 ntTSL 416.36■□□□□ 0.215e-8■■■□□ 18
XRN2Q9H0D6 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.211e-5■■■□□ 18
XRN2Q9H0D6 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.25e-8■■■□□ 18
XRN2Q9H0D6 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC16.32■□□□□ 0.25e-8■■■□□ 18
XRN2Q9H0D6 RAVER1-205ENST00000593136 500 ntTSL 516.28■□□□□ 0.21e-5■■■□□ 18
XRN2Q9H0D6 AGPAT3-216ENST00000497909 773 ntTSL 316.28■□□□□ 0.25e-8■■■□□ 18
XRN2Q9H0D6 DMKN-221ENST00000462538 582 ntTSL 1 (best)16.27■□□□□ 0.21e-5■■■□□ 18
XRN2Q9H0D6 WDR73-207ENST00000559015 2140 ntTSL 216.25■□□□□ 0.191e-5■■■□□ 18
XRN2Q9H0D6 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.192e-8■■■□□ 18
XRN2Q9H0D6 ELMO3-205ENST00000571638 681 ntTSL 516.1■□□□□ 0.171e-5■■■□□ 18
XRN2Q9H0D6 TBCB-210ENST00000589624 597 ntTSL 516.09■□□□□ 0.171e-5■■■□□ 18
XRN2Q9H0D6 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.151e-5■■■□□ 18
XRN2Q9H0D6 TYK2-214ENST00000530220 767 ntTSL 316.01■□□□□ 0.151e-5■■■□□ 18
XRN2Q9H0D6 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC15.99■□□□□ 0.151e-5■■■□□ 18
XRN2Q9H0D6 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.155e-8■■■□□ 18
XRN2Q9H0D6 PUF60-206ENST00000526151 557 ntTSL 315.94■□□□□ 0.145e-8■■■□□ 18
XRN2Q9H0D6 CERS4-207ENST00000558877 758 ntTSL 315.89■□□□□ 0.131e-5■■■□□ 18
XRN2Q9H0D6 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC15.87■□□□□ 0.135e-8■■■□□ 18
XRN2Q9H0D6 TBC1D9B-212ENST00000521469 2741 ntTSL 1 (best)15.84■□□□□ 0.131e-5■■■□□ 18
XRN2Q9H0D6 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC15.84■□□□□ 0.135e-8■■■□□ 18
XRN2Q9H0D6 DMKN-246ENST00000482321 866 ntTSL 215.8■□□□□ 0.121e-5■■■□□ 18
XRN2Q9H0D6 DDX41-215ENST00000512431 904 ntTSL 515.77■□□□□ 0.121e-5■■■□□ 18
XRN2Q9H0D6 DDX41-205ENST00000505081 2949 ntTSL 215.72■□□□□ 0.111e-5■■■□□ 18
XRN2Q9H0D6 FPGS-206ENST00000431857 959 ntTSL 515.7■□□□□ 0.11e-5■■■□□ 18
XRN2Q9H0D6 ADD3-213ENST00000487085 708 ntTSL 315.68■□□□□ 0.15e-8■■■□□ 18
XRN2Q9H0D6 ADD3-211ENST00000484622 401 ntTSL 515.68■□□□□ 0.15e-8■■■□□ 18
XRN2Q9H0D6 NADK-209ENST00000480499 549 ntTSL 215.68■□□□□ 0.12e-10■■■□□ 18
XRN2Q9H0D6 SLC19A1-206ENST00000460174 600 ntTSL 315.67■□□□□ 0.11e-5■■■□□ 18
XRN2Q9H0D6 DMKN-258ENST00000493979 648 ntTSL 1 (best)15.67■□□□□ 0.11e-5■■■□□ 18
XRN2Q9H0D6 DMKN-245ENST00000480507 441 ntTSL 1 (best)15.67■□□□□ 0.11e-5■■■□□ 18
XRN2Q9H0D6 DMKN-247ENST00000483855 606 ntTSL 1 (best)15.67■□□□□ 0.11e-5■■■□□ 18
XRN2Q9H0D6 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.15e-6■■■□□ 18
XRN2Q9H0D6 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.65■□□□□ 0.11e-5■■■□□ 18
XRN2Q9H0D6 TLN1-203ENST00000464379 814 ntTSL 315.64■□□□□ 0.095e-8■■■□□ 18
XRN2Q9H0D6 NINL-207ENST00000496509 735 ntTSL 515.63■□□□□ 0.095e-8■■■□□ 18
XRN2Q9H0D6 ADD3-218ENST00000495661 557 ntTSL 515.55■□□□□ 0.085e-8■■■□□ 18
XRN2Q9H0D6 ADD3-204ENST00000459738 229 ntTSL 215.55■□□□□ 0.085e-8■■■□□ 18
XRN2Q9H0D6 MOB1A-206ENST00000497054 784 ntTSL 215.51■□□□□ 0.072e-10■■■□□ 18
XRN2Q9H0D6 KRIT1-217ENST00000458177 1472 ntTSL 1 (best)15.51■□□□□ 0.071e-5■■■□□ 18
XRN2Q9H0D6 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.071e-5■■■□□ 18
XRN2Q9H0D6 TYK2-221ENST00000592137 536 ntTSL 315.36■□□□□ 0.052e-6■■■□□ 18
XRN2Q9H0D6 WDR73-201ENST00000398528 1915 ntTSL 1 (best)15.36■□□□□ 0.051e-5■■■□□ 18
XRN2Q9H0D6 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.042e-8■■■□□ 18
XRN2Q9H0D6 KRIT1-211ENST00000433016 855 ntTSL 515.33■□□□□ 0.041e-5■■■□□ 18
Retrieved 100 of 21,068 protein–RNA pairs in 22.5 ms