Protein–RNA interactions for Protein: Q9GZU7

CTDSP1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1Q9GZU7 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CTDSP1Q9GZU7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CTDSP1Q9GZU7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.4□□□□□ -0.1
CTDSP1Q9GZU7 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.4□□□□□ -0.1
CTDSP1Q9GZU7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC14.4□□□□□ -0.1
CTDSP1Q9GZU7 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CTDSP1Q9GZU7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CTDSP1Q9GZU7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CTDSP1Q9GZU7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CTDSP1Q9GZU7 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CTDSP1Q9GZU7 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CTDSP1Q9GZU7 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
CTDSP1Q9GZU7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC14.4□□□□□ -0.1
CTDSP1Q9GZU7 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CTDSP1Q9GZU7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.4□□□□□ -0.1
CTDSP1Q9GZU7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC14.4□□□□□ -0.1
CTDSP1Q9GZU7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC14.4□□□□□ -0.1
CTDSP1Q9GZU7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC14.4□□□□□ -0.1
CTDSP1Q9GZU7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.4□□□□□ -0.1
CTDSP1Q9GZU7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC14.4□□□□□ -0.1
CTDSP1Q9GZU7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.4□□□□□ -0.1
CTDSP1Q9GZU7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CTDSP1Q9GZU7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CTDSP1Q9GZU7 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
CTDSP1Q9GZU7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CTDSP1Q9GZU7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.4□□□□□ -0.1
CTDSP1Q9GZU7 AC093677.2-201ENST00000600169 1863 ntBASIC14.4□□□□□ -0.1
CTDSP1Q9GZU7 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CTDSP1Q9GZU7 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CTDSP1Q9GZU7 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 CICP6-201ENST00000457191 2729 ntBASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTDSP1Q9GZU7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CTDSP1Q9GZU7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTDSP1Q9GZU7 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CTDSP1Q9GZU7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTDSP1Q9GZU7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTDSP1Q9GZU7 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CTDSP1Q9GZU7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTDSP1Q9GZU7 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CTDSP1Q9GZU7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTDSP1Q9GZU7 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTDSP1Q9GZU7 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CTDSP1Q9GZU7 SDHAP1-207ENST00000440850 2000 ntBASIC14.38□□□□□ -0.11
CTDSP1Q9GZU7 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTDSP1Q9GZU7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CTDSP1Q9GZU7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTDSP1Q9GZU7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.38□□□□□ -0.11
CTDSP1Q9GZU7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC14.38□□□□□ -0.11
CTDSP1Q9GZU7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC14.38□□□□□ -0.11
CTDSP1Q9GZU7 AC239859.2-201ENST00000444165 318 ntBASIC14.38□□□□□ -0.11
CTDSP1Q9GZU7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTDSP1Q9GZU7 AL356740.2-201ENST00000601559 647 ntBASIC14.38□□□□□ -0.11
CTDSP1Q9GZU7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC14.38□□□□□ -0.11
CTDSP1Q9GZU7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTDSP1Q9GZU7 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CTDSP1Q9GZU7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CTDSP1Q9GZU7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTDSP1Q9GZU7 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.38□□□□□ -0.11
CTDSP1Q9GZU7 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTDSP1Q9GZU7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.38□□□□□ -0.11
CTDSP1Q9GZU7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CTDSP1Q9GZU7 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms