Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.27■□□□□ 0.68
FOXP3Q9BZS1 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.27■□□□□ 0.68
FOXP3Q9BZS1 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FOXP3Q9BZS1 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.27■□□□□ 0.68
FOXP3Q9BZS1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
FOXP3Q9BZS1 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FOXP3Q9BZS1 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.27■□□□□ 0.68
FOXP3Q9BZS1 AP003071.4-201ENST00000562276 1284 ntBASIC19.27■□□□□ 0.68
FOXP3Q9BZS1 AF186192.3-201ENST00000583427 947 ntBASIC19.27■□□□□ 0.68
FOXP3Q9BZS1 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
FOXP3Q9BZS1 AC026471.5-201ENST00000615068 467 ntBASIC19.27■□□□□ 0.68
FOXP3Q9BZS1 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
FOXP3Q9BZS1 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
FOXP3Q9BZS1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
FOXP3Q9BZS1 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
FOXP3Q9BZS1 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FOXP3Q9BZS1 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.68
FOXP3Q9BZS1 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.68
FOXP3Q9BZS1 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
FOXP3Q9BZS1 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
FOXP3Q9BZS1 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
FOXP3Q9BZS1 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
FOXP3Q9BZS1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.27■□□□□ 0.67
FOXP3Q9BZS1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
FOXP3Q9BZS1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
FOXP3Q9BZS1 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
FOXP3Q9BZS1 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.26■□□□□ 0.67
FOXP3Q9BZS1 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
FOXP3Q9BZS1 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.26■□□□□ 0.67
FOXP3Q9BZS1 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
FOXP3Q9BZS1 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXP3Q9BZS1 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXP3Q9BZS1 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
FOXP3Q9BZS1 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
FOXP3Q9BZS1 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
FOXP3Q9BZS1 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.26■□□□□ 0.67
FOXP3Q9BZS1 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXP3Q9BZS1 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.26■□□□□ 0.67
FOXP3Q9BZS1 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.26■□□□□ 0.67
FOXP3Q9BZS1 HLA-A-209ENST00000638375 975 ntBASIC19.26■□□□□ 0.67
FOXP3Q9BZS1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXP3Q9BZS1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXP3Q9BZS1 RCC2P6-201ENST00000526625 1557 ntBASIC19.26■□□□□ 0.67
FOXP3Q9BZS1 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
FOXP3Q9BZS1 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
FOXP3Q9BZS1 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXP3Q9BZS1 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXP3Q9BZS1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXP3Q9BZS1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXP3Q9BZS1 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXP3Q9BZS1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.26■□□□□ 0.67
FOXP3Q9BZS1 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXP3Q9BZS1 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXP3Q9BZS1 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FOXP3Q9BZS1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
FOXP3Q9BZS1 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FOXP3Q9BZS1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.25■□□□□ 0.67
FOXP3Q9BZS1 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXP3Q9BZS1 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXP3Q9BZS1 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXP3Q9BZS1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXP3Q9BZS1 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.25■□□□□ 0.67
FOXP3Q9BZS1 KRT16P5-201ENST00000455284 522 ntBASIC19.25■□□□□ 0.67
FOXP3Q9BZS1 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.25■□□□□ 0.67
FOXP3Q9BZS1 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FOXP3Q9BZS1 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.25■□□□□ 0.67
FOXP3Q9BZS1 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.25■□□□□ 0.67
FOXP3Q9BZS1 CD177P1-201ENST00000606252 935 ntBASIC19.25■□□□□ 0.67
FOXP3Q9BZS1 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FOXP3Q9BZS1 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
FOXP3Q9BZS1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FOXP3Q9BZS1 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FOXP3Q9BZS1 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.25■□□□□ 0.67
FOXP3Q9BZS1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXP3Q9BZS1 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXP3Q9BZS1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
FOXP3Q9BZS1 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
FOXP3Q9BZS1 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.24■□□□□ 0.67
FOXP3Q9BZS1 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.24■□□□□ 0.67
FOXP3Q9BZS1 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FOXP3Q9BZS1 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXP3Q9BZS1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXP3Q9BZS1 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXP3Q9BZS1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXP3Q9BZS1 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FOXP3Q9BZS1 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXP3Q9BZS1 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXP3Q9BZS1 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
FOXP3Q9BZS1 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXP3Q9BZS1 FAM197Y1-201ENST00000421178 764 ntBASIC19.24■□□□□ 0.67
FOXP3Q9BZS1 AL355355.2-201ENST00000442321 338 ntBASIC19.24■□□□□ 0.67
FOXP3Q9BZS1 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FOXP3Q9BZS1 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.24■□□□□ 0.67
FOXP3Q9BZS1 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.24■□□□□ 0.67
FOXP3Q9BZS1 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
FOXP3Q9BZS1 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.24■□□□□ 0.67
FOXP3Q9BZS1 C1QL1P1-201ENST00000568105 661 ntBASIC19.24■□□□□ 0.67
FOXP3Q9BZS1 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.24■□□□□ 0.67
FOXP3Q9BZS1 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FOXP3Q9BZS1 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms