Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
KRTAP3-1Q9BYR8 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
KRTAP3-1Q9BYR8 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC9.46□□□□□ -0.89
KRTAP3-1Q9BYR8 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
KRTAP3-1Q9BYR8 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
KRTAP3-1Q9BYR8 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC9.46□□□□□ -0.89
KRTAP3-1Q9BYR8 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
KRTAP3-1Q9BYR8 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC9.46□□□□□ -0.89
KRTAP3-1Q9BYR8 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
KRTAP3-1Q9BYR8 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
KRTAP3-1Q9BYR8 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC9.46□□□□□ -0.89
KRTAP3-1Q9BYR8 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
KRTAP3-1Q9BYR8 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC9.46□□□□□ -0.89
KRTAP3-1Q9BYR8 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 AC098934.4-201ENST00000564127 592 ntBASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 VPS53-216ENST00000574029 585 ntTSL 4 BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 MIR4758-201ENST00000577688 71 ntBASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 AL034417.3-201ENST00000641100 1043 ntBASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 KRT8P3-201ENST00000519669 1449 ntBASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC9.46□□□□□ -0.9
KRTAP3-1Q9BYR8 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 DLX3-202ENST00000512495 834 ntTSL 2 BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 GLRB-205ENST00000512619 728 ntTSL 3 BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 MIR5787-201ENST00000611784 55 ntBASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 WT1-AS_3.1-201ENST00000613262 234 ntBASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 AC108860.2-201ENST00000562760 2183 ntBASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 NBPF21P-201ENST00000425093 1451 ntBASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms