Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 AC134043.2-201ENST00000624206 2238 ntBASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 LINC00896-202ENST00000609602 2128 ntBASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 FEM1AP3-201ENST00000403722 1741 ntBASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 AC009053.2-201ENST00000563701 2365 ntBASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 UBQLN4P1-201ENST00000461599 1801 ntBASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 IRS3P-201ENST00000223076 1006 ntBASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 MFSD11-216ENST00000590393 1141 ntBASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 AL591742.1-201ENST00000604433 565 ntBASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms