Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC12.98□□□□□ -0.33
UPK3BQ9BT76 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UPK3BQ9BT76 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UPK3BQ9BT76 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UPK3BQ9BT76 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
UPK3BQ9BT76 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
UPK3BQ9BT76 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UPK3BQ9BT76 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UPK3BQ9BT76 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UPK3BQ9BT76 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
UPK3BQ9BT76 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UPK3BQ9BT76 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC12.98□□□□□ -0.33
UPK3BQ9BT76 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UPK3BQ9BT76 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
UPK3BQ9BT76 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UPK3BQ9BT76 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UPK3BQ9BT76 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UPK3BQ9BT76 ME2-218ENST00000640965 2476 ntTSL 5 BASIC12.98□□□□□ -0.33
UPK3BQ9BT76 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
UPK3BQ9BT76 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 GOLGA6L5P-202ENST00000515341 1828 ntBASIC12.97□□□□□ -0.33
UPK3BQ9BT76 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 BUB3-202ENST00000368859 667 ntTSL 3 BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 DUX4L26-201ENST00000489078 1255 ntBASIC12.97□□□□□ -0.33
UPK3BQ9BT76 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 NME3-204ENST00000563498 920 ntTSL 2 BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 AC141257.4-201ENST00000634557 245 ntBASIC12.97□□□□□ -0.33
UPK3BQ9BT76 AC136944.6-201ENST00000634818 245 ntBASIC12.97□□□□□ -0.33
UPK3BQ9BT76 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 PWWP2AP1-201ENST00000429776 2273 ntBASIC12.97□□□□□ -0.33
UPK3BQ9BT76 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 AC125437.2-201ENST00000625180 2167 ntBASIC12.97□□□□□ -0.33
UPK3BQ9BT76 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
UPK3BQ9BT76 KRT8P3-201ENST00000519669 1449 ntBASIC12.96□□□□□ -0.33
UPK3BQ9BT76 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC12.96□□□□□ -0.33
UPK3BQ9BT76 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK3BQ9BT76 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK3BQ9BT76 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC12.96□□□□□ -0.33
UPK3BQ9BT76 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK3BQ9BT76 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK3BQ9BT76 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
UPK3BQ9BT76 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UPK3BQ9BT76 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC12.96□□□□□ -0.33
UPK3BQ9BT76 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK3BQ9BT76 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UPK3BQ9BT76 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC12.96□□□□□ -0.33
UPK3BQ9BT76 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK3BQ9BT76 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK3BQ9BT76 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK3BQ9BT76 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK3BQ9BT76 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC12.96□□□□□ -0.33
UPK3BQ9BT76 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK3BQ9BT76 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK3BQ9BT76 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK3BQ9BT76 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UPK3BQ9BT76 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK3BQ9BT76 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK3BQ9BT76 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC12.96□□□□□ -0.33
UPK3BQ9BT76 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UPK3BQ9BT76 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK3BQ9BT76 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC12.96□□□□□ -0.33
UPK3BQ9BT76 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms