Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VGLL1Q99990 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
VGLL1Q99990 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
VGLL1Q99990 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VGLL1Q99990 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VGLL1Q99990 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VGLL1Q99990 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VGLL1Q99990 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
VGLL1Q99990 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC14.16□□□□□ -0.14
VGLL1Q99990 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
VGLL1Q99990 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.16□□□□□ -0.14
VGLL1Q99990 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC14.16□□□□□ -0.14
VGLL1Q99990 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
VGLL1Q99990 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VGLL1Q99990 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC14.16□□□□□ -0.14
VGLL1Q99990 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
VGLL1Q99990 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC14.16□□□□□ -0.14
VGLL1Q99990 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VGLL1Q99990 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VGLL1Q99990 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VGLL1Q99990 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC14.16□□□□□ -0.14
VGLL1Q99990 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VGLL1Q99990 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VGLL1Q99990 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VGLL1Q99990 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
VGLL1Q99990 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC14.16□□□□□ -0.14
VGLL1Q99990 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
VGLL1Q99990 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
VGLL1Q99990 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC14.16□□□□□ -0.14
VGLL1Q99990 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VGLL1Q99990 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC14.16□□□□□ -0.14
VGLL1Q99990 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VGLL1Q99990 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
VGLL1Q99990 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VGLL1Q99990 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VGLL1Q99990 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VGLL1Q99990 AC106820.2-201ENST00000563775 3264 ntBASIC14.16□□□□□ -0.14
VGLL1Q99990 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VGLL1Q99990 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VGLL1Q99990 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
VGLL1Q99990 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VGLL1Q99990 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
VGLL1Q99990 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC14.15□□□□□ -0.14
VGLL1Q99990 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
VGLL1Q99990 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC14.15□□□□□ -0.14
VGLL1Q99990 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VGLL1Q99990 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VGLL1Q99990 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
VGLL1Q99990 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VGLL1Q99990 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VGLL1Q99990 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VGLL1Q99990 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC14.15□□□□□ -0.14
VGLL1Q99990 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.15□□□□□ -0.14
VGLL1Q99990 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VGLL1Q99990 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VGLL1Q99990 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC14.15□□□□□ -0.14
VGLL1Q99990 HEIH-201ENST00000623091 1652 ntBASIC14.15□□□□□ -0.14
VGLL1Q99990 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC14.15□□□□□ -0.14
VGLL1Q99990 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC14.15□□□□□ -0.14
VGLL1Q99990 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VGLL1Q99990 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC14.15□□□□□ -0.14
VGLL1Q99990 AC004264.1-201ENST00000608354 794 ntBASIC14.15□□□□□ -0.14
VGLL1Q99990 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
VGLL1Q99990 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
VGLL1Q99990 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
VGLL1Q99990 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC14.15□□□□□ -0.14
VGLL1Q99990 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VGLL1Q99990 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
VGLL1Q99990 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC14.15□□□□□ -0.14
VGLL1Q99990 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
VGLL1Q99990 KRT8P41-201ENST00000533985 1514 ntBASIC14.15□□□□□ -0.14
VGLL1Q99990 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.15□□□□□ -0.14
VGLL1Q99990 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC14.15□□□□□ -0.14
VGLL1Q99990 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC14.14□□□□□ -0.15
VGLL1Q99990 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VGLL1Q99990 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.14□□□□□ -0.15
VGLL1Q99990 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
VGLL1Q99990 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
VGLL1Q99990 CD276-203ENST00000537340 2439 ntTSL 2 BASIC14.14□□□□□ -0.15
VGLL1Q99990 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VGLL1Q99990 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VGLL1Q99990 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VGLL1Q99990 RCC2P6-201ENST00000526625 1557 ntBASIC14.14□□□□□ -0.15
VGLL1Q99990 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
VGLL1Q99990 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VGLL1Q99990 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC14.14□□□□□ -0.15
VGLL1Q99990 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
VGLL1Q99990 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VGLL1Q99990 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
VGLL1Q99990 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VGLL1Q99990 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC14.14□□□□□ -0.15
VGLL1Q99990 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC14.14□□□□□ -0.15
VGLL1Q99990 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC14.14□□□□□ -0.15
VGLL1Q99990 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC14.14□□□□□ -0.15
VGLL1Q99990 AC090192.1-201ENST00000517740 490 ntBASIC14.14□□□□□ -0.15
VGLL1Q99990 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC14.14□□□□□ -0.15
VGLL1Q99990 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC14.14□□□□□ -0.15
VGLL1Q99990 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VGLL1Q99990 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
VGLL1Q99990 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms